Pseudomonas cichorii: PCH70_50290
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Entry
PCH70_50290 CDS
T03002
Name
(GenBank) outer membrane porin, OprD family
Organism
pci
Pseudomonas cichorii
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AHF70182
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All DBs
Position
complement(5813748..5815061)
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AA seq
437 aa
AA seq
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MFNKRIGLLALGIISASQAMAQGQADSKGFIDDSHLTINLRNAYINRDYKNEGDDKAEWG
QAFIGNFTSGFTQGTVGVGVDAFGLYGIRLDGGKGRSGSGGIDFFKPGSDGVDANGDNIP
TSSNHNLTRAGAAVKFRVSNTVLKYGDQMPQLPVLSYDNSRLLPESYTGTMITSKEIEGL
EVVAGRFTQEARKSAEGRDSGGLKSINVFGGSYKFTDAFSAAAYASDNEDVFKKQYLNLN
YVFALPQDQSLTLDFNGYKTKLDKDYSAAAAAGARDNKIWSLAATWAVGIHSFTLAHQRS
SGETAYNYGGYKNAGGFGDGGNTIYLANSYWSDFNGKDERSWQVAYGVDLSSLITPGLSY
KTAYVRGDNIDDGTPGSGNGTEREFFNQLTYVVQGGPAKDLSVRLRSSILRVSADAQGYN
SEGNEVRVFVDYPINVF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaacgtatcggtttgctcgctctgggcattatcagcgccagccaggcaatg
gcgcaggggcaagcagattccaagggcttcattgacgacagccacttgaccatcaatctg
cgcaacgcttacatcaaccgcgattacaagaacgagggtgacgacaaggctgaatggggc
caggcgttcatcggtaacttcacgtccggtttcacccaaggcactgtgggtgtgggcgtg
gatgcattcggtctgtacggcatccgtctggatggtggtaaaggtcgtagcggctctggc
ggtatcgacttcttcaaaccaggtagcgatggcgttgacgccaatggcgacaatattcct
acctcatcgaaccacaacctgacacgtgctggcgcagcggtaaaattccgcgtttccaac
actgtgctcaagtacggcgatcaaatgcctcagctgccagtgctgagctacgataactcg
cgcctgttaccggaaagttacaccggcaccatgatcacttccaaagagatcgaaggcctg
gaagtcgttgctggtcgtttcactcaggaagctcgcaagagtgctgaaggtcgcgacagc
ggtggcttgaagagcatcaacgtgttcggtggtagctacaagttcactgacgcattcagc
gcagcagcttatgcttccgacaacgaagatgtcttcaagaagcagtacctgaacctgaac
tacgtcttcgctctgccacaagaccagtctctgactctggacttcaacggctacaagacc
aagctggacaaggactactcggctgctgcagccgctggcgcacgtgacaacaagatctgg
agcctggcggcgacctgggctgtgggtatccactccttcaccctggctcaccaacgcagc
agcggcgagactgcctacaactacggcggctataaaaatgccggtggtttcggtgatggc
ggcaacaccatctacctggccaactcctactggtctgacttcaacggtaaggacgagcgt
tcgtggcaagttgcctacggcgtcgacctgtccagcctgatcactccaggcctgagctac
aagactgcctacgttcgcggtgacaacatcgacgacggcactccgggcagcggcaacggt
actgagcgcgagttcttcaaccagctgacttacgtggtacagggcggcccggccaaggac
ttatccgttcgcctgcgtagctcgatcctgcgtgtttccgctgacgctcagggttacaac
agcgaaggtaacgaagtgcgtgtctttgtggattacccaatcaacgtcttctaa
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