KEGG   Pseudomonas cichorii: PCH70_50370
Entry
PCH70_50370       CDS       T03002                                 
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pci  Pseudomonas cichorii
Pathway
pci02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pci00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PCH70_50370
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pci02022]
    PCH70_50370
Two-component system [BR:pci02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PCH70_50370
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 FleQ Mg_chelatase AAA HTH_8 DUF6716 bpMoxR AAA_16 HTH_43 TadZ_N HTH_35 AAA_3
Other DBs
NCBI-ProteinID: AHF70190
LinkDB
Position
5825514..5826899
AA seq 461 aa
MSSDTAIDSQIQVVLIDDDSHLRQALSQTLDLAGLKVLPLTEANGLASRIGRDWPGVIVS
DIRMPGMDGLELLSHLHSQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALALRRLVLDNRSLRLALSDRQQLSTRLVGQSTPMLRLREQIGALAATRADVLILG
ETGAGKEVVARALHDLSNRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSMDVQVKLLRLLQERVVERMGSNQQIPLDIRVIAATKEDLRQAA
DQGRFRADLYYRLNVASLRIPPLRERGEDALMLFEHYADAASMRHGIPKHELTPGQRALL
LRHNWPGNVRELQNAAERFALGLELELEGSTTPDAAPVSGGLSDQVESFERALIAAELTR
PHSSVRSLAEALGLPRKTLHDKLRKHGLSFGDSTGAADELE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagttcggataccgccatcgacagccagattcaagtggtgctgatcgacgacgactcg
cacctgcgccaggccttgagccagacgctcgaccttgcgggcctgaaagtcctgccactg
accgaagccaacgggctggccagccgcatcggtcgcgactggccgggcgtcatcgtcagc
gatatccgcatgcccggcatggatggcctggaactgctgagccacctgcacagccaggac
ccggaattgccggtcttgctgatcaccggccatggcgatgtcccgctggcggtccaggcc
atgcgcgccggggcctatgatttcctcgaaaaaccgttcgccagcgatgccttgctcgac
agcgtgcgccgggcgctggcactgcggcgtctggtgctggataaccgcagcctgcgcctg
gccttgagtgatcgccagcaattgagcacccggctggtgggccagtccacgccgatgctg
cgcctgcgcgaacagatcggcgcactggcggcgacccgcgcagacgtgctgatcctgggt
gaaaccggcgcaggcaaggaagtggttgccagagccttgcatgacctgtccaaccgccgc
aacggcccgttcgtggcgatcaacgccggggccttggctgaatcggtggtggaaagcgag
ctgttcggtcatgagccaggcgctttcaccggcgcgcaaaagcgtcgcatcggcaagttc
gagttcgccaacggcggcacgctgtttctcgacgaaatcgaaagcatgagcatggacgtg
caggtcaaactgctgcgtctgttgcaggagcgtgtggtcgagcgcatgggcagcaaccag
cagatcccgctggatatccgtgtgattgccgccaccaaggaagacctgcgtcaggccgcc
gatcaagggcgtttccgggcggatttgtattaccgcctgaatgtcgcttcgctgcgcatt
ccgccgctgcgagagcgaggcgaagacgcgctgatgctgttcgagcattacgccgatgcc
gccagcatgcgccatggcattcccaagcatgaactcacgccgggccaacgcgctcttttg
ctgcgccacaactggccgggcaatgtgcgcgaactgcagaacgccgccgagcgcttcgct
ctggggctggaactggagctggaaggcagcaccacgccggacgccgcgccggtcagcggc
ggcttgagcgatcaggtggaaagtttcgagcgcgccctgattgctgccgaactgacacgc
ccgcacagttcggtccgcagcctcgccgaagcgctggggctgccgcgcaagaccttgcac
gacaagctgcgcaaacacggcctgagttttggcgacagcacgggagcagccgatgagctc
gaatga

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