Prosopis cineraria: 129300050
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Entry
129300050 CDS
T09047
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
pcin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129300050
03083 Polycomb repressive complex
129300050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129300050
Enzymes [BR:
pcin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129300050
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
129300050
HDAC complexes
Sin3A-HDAC complex
129300050
BRAF-HDAC complex
129300050
REST complex
129300050
SHIP complex
129300050
MiDAC complex
129300050
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
129300050
Heterochromatin formation proteins
Other heterochromatin formation proteins
129300050
Chromatin remodeling factors
NuRD complex
129300050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129300050
NCBI-ProteinID:
XP_054794551
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELAKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKEIGEKEGKFYAINVPLKDGIDDPSFNRLFKT
IISKVVEIYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVRKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENDYIKYFAPEFSLKIPNGHIENLNSKSYLSTIK
MQVLENLRYIQHAPSVQMQEVPPDFYIPDYDEDEQNPDERIDQHTQDKQIQRDDEYYEGD
NDNDHHMDDV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggacaggatctcttacttctacgatggtgacgtgggaagcgtttacttt
gggccaaaccatccaatgaagcctcaccgtctttgcatgacccatcatcttgtcctctca
tacgagcttcataagaagatggaaatttatcgtccacacaaggcttatcctgttgagctt
gcccagtttcattcagctgattatgttgagtttttgcacaggattacacctgacactcag
catctgttctcgaatgaattggcaaaatataatcttggagaagactgccctgtatttgac
aacttatttgaattttgtcaaatctatgccggtggaaccatagatgctgcacgtcgatta
aacaatcaactctgtgacattgctataaattgggctggtggactgcaccatgccaagaaa
tgcgaggcatctggattttgttacatcaatgacttggttttaggaatcttggagcttctt
aaatatcatgctcgtgttttatatattgatatagatgtccaccatggtgatggagtagaa
gaagccttctacttcactgatagggtgatgactgttagttttcacaagtatggagacatg
ttctttccaggaactggtgatgtcaaggaaataggagaaaaagagggcaagttttatgcc
attaatgtcccccttaaagacggaatagatgatcctagcttcaatcggctttttaagact
attatttctaaggttgtcgaaatatatcaacctggtgtgatagttctccaatgtggggca
gattcacttgctggagaccgtctgggttgcttcaatctttccattgatggtcatgctgaa
tgtgttaaatttgtaaggaagttcaatttgcccttgctggtcactggaggcgggggatac
acaaaagagaatgtagctcggtgttggactgttgaaactggagttcttctagatacagag
cttccaaatgagatccctgagaatgattacatcaaatattttgctccagaattttccttg
aagattccaaatgggcacatagagaatttaaatagtaaatcatatcttagcaccatcaaa
atgcaagtcttggaaaatctccgttacatccaacatgctcctagtgtgcaaatgcaggag
gtccctccggacttctacattcctgattacgatgaagatgagcaaaaccctgatgagcgc
attgatcagcacactcaagacaagcaaatccagcgtgatgatgaatattatgaaggtgac
aatgacaacgatcatcacatggatgatgtgtga
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