Prosopis cineraria: 129312702
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Entry
129312702 CDS
T09047
Name
(RefSeq) probable CCR4-associated factor 1 homolog 2
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129312702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129312702
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129312702
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129312702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
129312702
NCBI-ProteinID:
XP_054811355
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MEQEFSLIRAAKNKFPYVFLNTKFSGSLFTERSYGALSGNLGLAKLIQVGLTLSDEQGNI
PMIMSSTTHEAKQRVWQFNFCEFDPKTDPKSRDIIETLIYNGIDFEKNKNCGIKYSDFAG
FLMSSRLVQDDKVQWIAFGSSDFGYMVKLLTGKKNLPETEQEFFKILKDFFPVSYDLNYL
IKFTTNLRGELEDVATVLREKRVGPTAQAGSDSLLTSRVFNKLKHQHVYFNGAIPETCRG
VLSGLAGIEL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagagttctcgttgattcgtgcagcaaaaaacaagttcccgtatgtattcttg
aacacaaaattctcaggatcgctttttacagaaaggagttatggagcattgtcaggaaac
ctaggactcgccaaactcattcaagtgggtctcacgttgtctgacgaacaagggaacatt
cccatgatcatgagttcgacaacgcacgaggccaagcaacgtgtctggcagttcaacttc
tgcgagttcgatccaaaaaccgatcccaaatctcgagacatcatcgagactctaatttac
aatggtatagattttgagaagaacaagaattgtggtatcaaatacagcgattttgcaggg
tttttaatgtcgtcgaggcttgttcaggacgataaggttcaatggattgcctttggttcg
tctgattttgggtacatggtgaagctgcttactgggaagaagaatcttccggaaacagaa
caagagttcttcaagattcttaaggatttcttccctgtttcttatgatctgaattacctg
ataaaattcaccaccaacctgcgaggtgaactggaagacgtggctacggttttgagggag
aagagagttggaccgacggcacaagccggttcagatagtttgctaacgagtcgtgtattc
aataagctcaagcatcagcatgtgtacttcaatggagctatacctgagacatgtcgtggt
gttttgtccggcttggctggtattgaactttag
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