Prosopis cineraria: 129313055
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Entry
129313055 CDS
T09047
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129313055
09122 Translation
03013 Nucleocytoplasmic transport
129313055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129313055
03041 Spliceosome [BR:
pcin03041
]
129313055
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129313055
Spliceosome [BR:
pcin03041
]
Complex C
Other components
EJC/TREX
129313055
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129313055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
129313055
NCBI-ProteinID:
XP_054811859
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEVFKRAILEPGPPESFALQTVQEVIKPQRQTKLAQDENQFLENILRMLLQELVSSAVQS
GEQIMLYGQSMDDNETTQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILTFLAHFFPLSE
RSALNIKGVFNTSNETKYEKDPPEGISIDFNFYKTFWSLQEYFSNPNSLNLAPTKWQKFT
SSLTVVLNTFEAQPLSDEVGDANNLEEESANFSIKYLTSSKLMGLELKDPSFRRHILVQC
LILFDYLKAPGKGDKDLPSESMKEEIKSCEERVKKLLELTPPKGRAFLHKIEHVLEREKN
WVWWKRDGCPPYEKQPMEKKVVQDGAKKRRPRYRLGNKELSQLWRWADQNPNALTDPQRV
RTPSIMEYWKPLAEDMDPSAGIEAEYHRKNNRVYCWKGLRFSARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNDRAKRAKKEETKGTVHHVEGNQIAAPAAEADGEGTRADAS
AAPMEFDAVAVPASQGGTLTPDELQKQSSDTDVGQEAGQLEADAEGEVEAGMIDGETDAD
VDL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtttaaaagggccatactggagcctggcccgcctgaaagttttgctttgcag
actgttcaggaagtgataaagcctcagaggcaaacaaaattggctcaagacgagaatcag
ttcctggaaaatattctacggatgctgcttcaagaactagtgtcctctgcagtgcagtca
ggagagcagataatgctgtatggacaatcaatggatgacaatgagacaactcagggtcac
attcctcgccttcttgatatagtgctatatctttgtgagaaagaacatgttgaaggtggc
atgatttttcagctgttggaagacttaacagaaatgtctacaatgaaaaactgcaaagac
atttttgggtatattgagagcaaacaagatattttaggaaagcaagaactttttgctcgg
ggaaaacttgtgatgctgaggacctgcaatcagcttcttcgccggttgtcaaaggcaaat
gatgtggtcttttgtggacgaattctcacatttctggctcatttcttcccactatctgag
cgttcagccttaaatattaaaggagtttttaacacatcaaatgaaacaaaatatgagaaa
gacccccctgaaggtatatctatagatttcaatttttataagactttctggagcttacag
gaatatttttctaatccgaattctctaaatcttgctccgacaaagtggcagaaatttaca
tctagcttaacggtcgtgctgaatacttttgaagcacaacctttaagtgatgaagtagga
gatgctaataatttggaggaagagtcagctaattttagtataaaatatctcactagcagt
aagctaatgggcctagagttaaaagacccaagttttcgacgccatattcttgtccagtgt
ctcatattgttcgactatttgaaggctcctggaaaaggtgacaaggatttgccatctgaa
agcatgaaagaagagataaaatcatgtgaggagcgtgttaaaaagcttcttgaactaact
ccacccaaagggagggcatttcttcataaaattgagcatgtactggaacgagaaaagaat
tgggtatggtggaaacgtgatggctgcccgccatatgaaaaacagccaatggagaagaaa
gtagtgcaagatggggccaagaagcgtaggccaagatatagattgggcaacaaagaactc
tctcagttgtggaggtgggctgatcaaaatccgaatgctttaactgatcctcagcgtgtt
agaactccttcaattatggaatactggaaacctttggctgaagatatggatccatcagcg
ggtatagaagctgaatatcaccgcaagaataaccgggtttattgttggaaaggtcttcgt
ttttcagctcgacaagacttggagggattttctaggtttacagaccatggcattgaaggg
gttgtcccgctggaacttttgccacctgacgttcgatctaaatatcaagctaaaccaaat
gacagggcaaaacgggcaaaaaaggaagaaacaaaaggcactgttcatcatgttgaggga
aatcagattgctgcgcctgctgctgaggctgatggagaaggtacaagagctgatgcatcg
gcagctccgatggagtttgatgctgtcgctgtcccagcttctcaaggcggaacactgaca
ccagatgaactccagaagcagagctccgacaccgacgttggtcaggaagcagggcaattg
gaagcagatgctgagggtgaggtagaggctggtatgatagatggagagacagatgcagat
gttgatttataa
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