KEGG   Prosopis cineraria: 129313055
Entry
129313055         CDS       T09047                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
pcin  Prosopis cineraria
Pathway
pcin03013  Nucleocytoplasmic transport
pcin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129313055
  09122 Translation
   03013 Nucleocytoplasmic transport
    129313055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcin03019]
    129313055
   03041 Spliceosome [BR:pcin03041]
    129313055
Messenger RNA biogenesis [BR:pcin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129313055
Spliceosome [BR:pcin03041]
 Complex C
  Other components
   EJC/TREX
    129313055
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129313055
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 129313055
NCBI-ProteinID: XP_054811859
LinkDB
Position
Unknown
AA seq 603 aa
MEVFKRAILEPGPPESFALQTVQEVIKPQRQTKLAQDENQFLENILRMLLQELVSSAVQS
GEQIMLYGQSMDDNETTQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILTFLAHFFPLSE
RSALNIKGVFNTSNETKYEKDPPEGISIDFNFYKTFWSLQEYFSNPNSLNLAPTKWQKFT
SSLTVVLNTFEAQPLSDEVGDANNLEEESANFSIKYLTSSKLMGLELKDPSFRRHILVQC
LILFDYLKAPGKGDKDLPSESMKEEIKSCEERVKKLLELTPPKGRAFLHKIEHVLEREKN
WVWWKRDGCPPYEKQPMEKKVVQDGAKKRRPRYRLGNKELSQLWRWADQNPNALTDPQRV
RTPSIMEYWKPLAEDMDPSAGIEAEYHRKNNRVYCWKGLRFSARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNDRAKRAKKEETKGTVHHVEGNQIAAPAAEADGEGTRADAS
AAPMEFDAVAVPASQGGTLTPDELQKQSSDTDVGQEAGQLEADAEGEVEAGMIDGETDAD
VDL
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggaagtgtttaaaagggccatactggagcctggcccgcctgaaagttttgctttgcag
actgttcaggaagtgataaagcctcagaggcaaacaaaattggctcaagacgagaatcag
ttcctggaaaatattctacggatgctgcttcaagaactagtgtcctctgcagtgcagtca
ggagagcagataatgctgtatggacaatcaatggatgacaatgagacaactcagggtcac
attcctcgccttcttgatatagtgctatatctttgtgagaaagaacatgttgaaggtggc
atgatttttcagctgttggaagacttaacagaaatgtctacaatgaaaaactgcaaagac
atttttgggtatattgagagcaaacaagatattttaggaaagcaagaactttttgctcgg
ggaaaacttgtgatgctgaggacctgcaatcagcttcttcgccggttgtcaaaggcaaat
gatgtggtcttttgtggacgaattctcacatttctggctcatttcttcccactatctgag
cgttcagccttaaatattaaaggagtttttaacacatcaaatgaaacaaaatatgagaaa
gacccccctgaaggtatatctatagatttcaatttttataagactttctggagcttacag
gaatatttttctaatccgaattctctaaatcttgctccgacaaagtggcagaaatttaca
tctagcttaacggtcgtgctgaatacttttgaagcacaacctttaagtgatgaagtagga
gatgctaataatttggaggaagagtcagctaattttagtataaaatatctcactagcagt
aagctaatgggcctagagttaaaagacccaagttttcgacgccatattcttgtccagtgt
ctcatattgttcgactatttgaaggctcctggaaaaggtgacaaggatttgccatctgaa
agcatgaaagaagagataaaatcatgtgaggagcgtgttaaaaagcttcttgaactaact
ccacccaaagggagggcatttcttcataaaattgagcatgtactggaacgagaaaagaat
tgggtatggtggaaacgtgatggctgcccgccatatgaaaaacagccaatggagaagaaa
gtagtgcaagatggggccaagaagcgtaggccaagatatagattgggcaacaaagaactc
tctcagttgtggaggtgggctgatcaaaatccgaatgctttaactgatcctcagcgtgtt
agaactccttcaattatggaatactggaaacctttggctgaagatatggatccatcagcg
ggtatagaagctgaatatcaccgcaagaataaccgggtttattgttggaaaggtcttcgt
ttttcagctcgacaagacttggagggattttctaggtttacagaccatggcattgaaggg
gttgtcccgctggaacttttgccacctgacgttcgatctaaatatcaagctaaaccaaat
gacagggcaaaacgggcaaaaaaggaagaaacaaaaggcactgttcatcatgttgaggga
aatcagattgctgcgcctgctgctgaggctgatggagaaggtacaagagctgatgcatcg
gcagctccgatggagtttgatgctgtcgctgtcccagcttctcaaggcggaacactgaca
ccagatgaactccagaagcagagctccgacaccgacgttggtcaggaagcagggcaattg
gaagcagatgctgagggtgaggtagaggctggtatgatagatggagagacagatgcagat
gttgatttataa

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