Prosopis cineraria: 129315405
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Entry
129315405 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129315405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129315405
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129315405
Spliceosome [BR:
pcin03041
]
Complex A
U2 snRNP components
U2 related factors
129315405
Complex B
129315405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
129315405
NCBI-ProteinID:
XP_054815040
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MDEGKRKSRKEDYEGKEEDSKRSRRERDREKTGDKVKDRSEGRHRDREKRDRESRRYERE
KSSDSDERFDREREKHRDKDKDRTRVHDEERERARDKKRERDKEERERERRDRREKEREK
EREKDRERERDRREREREREVERERGRRVKEREKRKEVDSECSDDDSRDKERKRHKKDDD
DYKGREQEKSGSKSSRQTENIEEGPRKKSGNDNSDANESKPSREEELEDEHRRLDEEMEK
RRRRVQEWQELRRKREEAEREKRGEASADEPKFGKAWTLEGESDDEEGTTTGKPNTSMDV
DEDDKPSDKEPKDSMAVDVSNGPVTSNLHDETDGSHADEEIDPLDAFMSSMVLPEVEKLS
SSVAPESSNQTSDSKPKGNKDEQSNGRNPRKGSNKSIGRIIPGEESDLDYEDLEIEDDPL
DEDDDEFMKRVKKTKAEKLSIVDHSKIDYKPFKKNFYIEVKEIAKMTPEEVAAYRKELEL
KIHGKDVPKPVKSWNQIGLTSKILETIKKLNYEKPMTIQAQALPVIMSGRDCIGIAKTGS
GKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVY
GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFE
PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVR
PENDRFFRLLELLGEWYEKGKILIFVHSQEKCDALFKDLLRHGYPCLSLHGAKDQTDRES
TISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAI
TFISEEEARYAPDLVKALELSEQIVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFN
EEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISQHPALAQILVAATKANTP
AMPSTSQVVSNGGLPVSLPAVLGLQTAGVMPGTGLPIVPSDGATRAALAAMNLQNKLAKI
AGAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKIPGPGER
KLYLFIEGPSEQSVKRAKAELKRVLEDITNQALQLPGGAQPGKYSVV
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaagcgtaaatctaggaaggaagattatgaagggaaggaagaggattcc
aaaaggagtcgccgtgaacgagatcgtgagaagactggtgataaagttaaggatagaagt
gaagggaggcatagggatagagagaagagagatcgtgagagccgacgctatgagagagag
aaaagcagtgattctgatgaaagatttgatagagaaagagagaagcatagagacaaggat
aaggataggacacgagttcatgatgaagaaagagaaagagctcgagacaagaaaagggaa
agagacaaggaagaaagggaaagggagaggagagataggagggagaaggaaagagagaaa
gaaagggagaaggatagagaaagggaacgggatcgaagagagcgtgaaagggagagggaa
gtggaaagagaaagggggaggagagtaaaagagagggagaagcgtaaggaagttgatagt
gagtgtagtgatgatgattcaagggataaagaaagaaagcggcacaagaaagatgatgat
gattacaagggtagagagcaggagaagagtggtagcaagtcaagtaggcaaactgagaac
attgaggagggcccaaggaaaaagagtggaaatgataactcagatgctaatgaaagcaaa
ccaagtcgtgaggaggagttagaggatgaacataggaggttggatgaagagatggaaaag
aggagaaggagagttcaggaatggcaggagttgagaaggaagagggaggaagctgagaga
gaaaagcgtggtgaagcaagtgctgatgaacccaagtttggaaaggcctggacacttgaa
ggggaatctgatgatgaagaaggaaccactacagggaagccaaatacatctatggacgta
gatgaagatgacaaaccttcggataaagaacctaaggattcgatggcagtagatgttagt
aatggacctgttacttctaatttacatgatgagactgatggttctcatgcagatgaggag
attgatccattggatgctttcatgagttctatggttttgcctgaagttgagaagctgagt
agttctgtggctcccgaatcttctaatcaaacttctgactcaaagcccaaaggtaacaag
gatgagcaaagtaatggtaggaaccctaggaaagggtcaaataaatcaattgggagaata
attcctggtgaagagtctgacttagattatgaagaccttgaaattgaggatgatccatta
gatgaagatgatgatgaattcatgaaaagagtaaagaaaaccaaagctgagaaactttct
attgttgaccactcaaagattgattataagccattcaagaaaaatttttatattgaagta
aaggagattgccaagatgactcctgaagaagttgcagcatataggaaggagttggagttg
aagatacatggaaaggatgtaccaaagcctgtaaaatcatggaatcagattggacttact
agcaaaattttggagacaataaagaagcttaattatgaaaagccaatgactattcaagct
caagcactccctgtaattatgagcggtagagattgcattggaattgctaaaactgggtca
ggtaaaacccttgcttttgttctgccaatgttgaggcacatcaaggatcagccaccagtt
gttgcaggagatggaccaattggccttattatggcccctacaagggaactagttcaacag
attcacagtgatataaaaaaatttgcaaaagtacttggtctcaggtgtgtgcctgtctat
ggaggttctggtgttgcccagcaaatcagtgaattgaaacgtggtactgagatagtggtt
tgtactccaggtaggatgattgacatactatgcactagtggtggaaaaataactaacctg
cgtagagtcacttatctggtcatggatgaggctgatcgtatgtttgacatgggcttcgaa
cctcaaatcacccgaattgttcagaatattcgaccagatcgacaaacagttctcttttct
gctacatttcctcgtcaggttgaaattctggctcgtaaggttttgaacaaacctgttgaa
atacaagttggtggaaggagtgtcgtcaacaaggacataacacagctagtagaggtgagg
ccagaaaatgataggttctttaggctcttagaattacttggggaatggtatgagaaggga
aagattttgatatttgtccactcacaggagaaatgcgatgctttgttcaaggatttgctt
agacatggttatccatgcctttctcttcatggggccaaggatcagacagatcgtgaatcc
acaatttctgacttcaaaagcaatgtctgcaatttgctgattgcaacaagtattgcagcc
aggggtttagatgtcaaggagcttgaattggtcatcaattttgatgttccaaaccactat
gaagattatgtgcatcgtgttggacgtacaggccgagctggtcggaagggttgtgctata
acatttatctcagaggaagaagcaagatatgcaccagatctggttaaagctttggagcta
tctgaacaaatagttcctgatgacctgaaagctcttgctgatggatttatggcaaaagtt
aatcaaggacttgagcaagcccatgggactggctatggaggcagtggctttaaatttaat
gaagaagaagatgaggtaaggagagcagcaaagaaagcacaagccaaagaatatgggttt
gaagaagataagtctgattctgaggatgaagatgaaggtattaggaaggcaggaggtgac
atctcacagcatcctgctcttgcccagattctagttgctgccaccaaagcaaacactcct
gcaatgccctctacttcccaggtagtttcaaatggaggactgcctgtttctttgcctgct
gttcttggtctccagactgcaggagtcatgcctgggacagggctgcccattgttccaagt
gatggagcaactcgggcagcattagctgctatgaacctgcaaaataaattagcaaagatt
gctggtgctatgcctgagcattatgaagctgagttggagataaatgacttcccccaaaat
gctcggtggaaagtcacacacaaggaaactctgggcccaatttctgagtggactggagct
gctattaccaccagggggcagtatttcccacctggcaagatccctggacctggtgaacgg
aaactctacttgttcattgagggccccagtgaacagtctgttaagagagcaaaagcagaa
ttgaagcgtgtgctggaagatataacaaatcaggctttgcagcttcctggtggtgctcaa
ccaggcaaatactctgttgtataa
DBGET
integrated database retrieval system
