Prosopis cineraria: 129321327
Help
Entry
129321327 CDS
T09047
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
pcin
Prosopis cineraria
Pathway
pcin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129321327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129321327
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
129321327
Prokaryotic type
Archaeal type
TFB
129321327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
TF_Zn_Ribbon
DUF2282
PyrI_C
Motif
Other DBs
NCBI-GeneID:
129321327
NCBI-ProteinID:
XP_054823043
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MRNPLAAQIEHRPQRIHLEKEERKKMKCPYCAAAQGRSATTSSARFISECTSCGRVVEER
QSHPHHLFHLRAQDNPLCLVTPDLPSIQSFHQSQDDDDPFEPTGFITAFSTWSLEPSPLY
LQSCLSFSGHLAELERVLESSSSSSSSSTPSSSTSSTVVVDNLRAYMQIIDVASILGLDY
DISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIG
KYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNP
ISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPP
ERAFPTTVIASGRSSATKVDAIDVNSALDRDKLIEIKPSKSNDVPVMVHQLRGKDDVESK
SNACVTHSTLNQQSASWQSQLPIGACNHKITGEKGRNVLQGMDIEGQQHNHLQPEQKSED
TNGININPFQNPNHLSSPSASSAGPVMKPYSALPSSAPPNV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatccactggcagcacagatagagcacaggcctcagaggatccatttggagaaa
gaggaaaggaagaaaatgaagtgcccttactgtgcggcggctcaagggcgtagcgccacc
accagctctgcccgcttcatatcagagtgcacatcttgcggccgagttgttgaagagcga
caatcccatcctcaccatctcttccacctccgcgcacaagacaatcctctctgtcttgtc
actccggacctcccctccatccaatccttccatcagagccaggacgatgatgaccccttc
gagcccacaggcttcatcactgcattttccacttggtccctcgagcccagccctctctac
ctccagtcctgtctctcattctctggtcacctcgccgagcttgagagggttctcgagtcg
tcctcgtcttcatcctcgtcctcgacaccatcgtcttcaacttcgtcgacggttgtggtt
gacaatttgagggcgtacatgcagattattgatgtcgcgtcgatacttgggttggactac
gatatctcggaccatgcgtttcaattattcagggattgttgttcggctacttgtttgaga
aatcggagtgtcgaagcgcttgccactgctgctcttgttcaggcaattagagaggctcaa
gaacctcgaacccttcaggaaatttcaattgcagccaatgtgccacaaaaggaaattggg
aaatacatcaagatattaggggaggctttgcagctcagtcaacctattaatagcaattct
atctcagtccatatgcctagattttgtacccttctacagcttaataaatctgctcaggaa
ctggctactcacataggagaggttgtgatcaacaaatgcttctgcacacgcaggaatcct
attagcatttcagccgctgctatatacctggcctgccaacttgaagacaagcgtaaaacc
caggcagaaatctgcaaggtgaccggtcttactgaagtcactcttcgtaaagtgtacaag
gaacttctagagaattgggatgatttgcttccctctaattatacaccagctgttcctccc
gagagggcatttcctactactgtaattgcttcaggtcgttcatcagcaactaaggttgat
gcaatagatgttaattctgctttggacagagacaagctaatagaaatcaaacctagcaaa
tcgaatgacgttccagtcatggtacatcagctcagggggaaagatgatgttgaaagtaag
agcaatgcttgcgtgacccactcgacactgaatcagcagtcagcttcgtggcaatcccag
cttcctattggggcgtgtaatcataaaattacaggagaaaaaggtcgaaatgttttgcaa
ggaatggacattgagggacagcagcataaccacctacagcctgaacagaagtctgaagac
acaaatggtattaatattaatccttttcaaaatcccaaccatcttagcagtccttctgcg
tcgtctgctggccctgttatgaagccctattcggctttgccttcatctgcgcctccaaat
gtttga
DBGET
integrated database retrieval system
