Paraburkholderia caledonica: CUJ87_00350
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Entry
CUJ87_00350 CDS
T05740
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcj03009
]
CUJ87_00350
Enzymes [BR:
pcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CUJ87_00350
Ribosome biogenesis [BR:
pcj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CUJ87_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
AXF13039
UniProt:
A0A2Z5M7F7
LinkDB
All DBs
Position
PHRS4_A:84568..86007
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AA seq
479 aa
AA seq
DB search
MNLKPSSRSASSSARPRESRLSVLHLAPESLGFALDCAAQAVGAVRLGAALPAALQSVFV
SAPEGSAAAARGAVQDIAYRTMRRLGTAEWLIAKLVKKAPPPHVGHLLACAIALLIDDEA
SAAYTPFTVVDQAVSAISARREFSFAKGLVNAVLRNFLREREALLEAAQTDEVARWNSPS
WWIDAVRRAWPDAWQEVLAAGNTQGPLTLRVNARHSTVDAYLQVLEQHHIAASKAGEYAV
KLATPMPVDRIPGFSEGVVSVQDAGAQLAAQLLGVRDGMRVLDACAAPGGKTGHLLELAN
LQLVALESDATRARRIGENLQRLKLQAEVRIGDAGTPSKWHDDIDQPFDRILADVPCSAS
GIVRRHPDIRWLRRASDIPALVDEQRRILDALWPLVKPGGELLYVTCSIFPEEGELQAQW
FGNKHQDAVRLDAPGQLLPTVARAPADTSAGSHAGEFADISAGANSDHDGFFYARFQKR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaagccttcttcgcgttctgcttcttcgtcggcgcgtccgcgcgaatcccgt
ttgtccgtgctgcatctcgcgccggaatcgctcggctttgcactcgactgcgcagcgcaa
gcggtgggcgccgtccgtctcggggcggctttgccggccgcgctgcaatctgttttcgtg
tctgcgcccgagggtagtgccgctgctgcgcgcggcgcggtgcaggacatcgcctatcgc
acgatgcgccgtctcgggactgccgaatggttgatcgcaaagctcgtcaaaaaggcgccg
ccgccgcacgtcggtcatctgcttgcctgcgcgatcgcgcttctgatcgacgacgaagcc
agcgcagcttacacgccgttcacggtggtcgatcaggcagtgagcgcgatctcggcgcgt
cgcgaattttcgttcgccaaggggcttgtcaacgccgtgctgcgcaacttcctgcgcgaa
cgcgaggcgctgctcgaagcggcgcagaccgatgaagtcgcgcgctggaactccccgtca
tggtggatcgacgcggtaagacgcgcatggcccgacgcgtggcaggaggtgctcgcggcc
ggtaacacgcaaggtccgttgacgctgcgtgtgaacgcccgtcattcaacggttgatgcc
tatctgcaggttctcgagcagcatcacattgccgcgagcaaagctggcgaatacgcggtg
aagctcgccacgcccatgcccgtcgaccgcattcccggctttagcgaaggcgtggtctcg
gtgcaggacgcaggcgctcagctcgccgcgcaactgctcggcgtgcgtgacggcatgcgc
gtgctcgacgcctgcgcggcgcccggcggcaagaccgggcatctgctggaactggcgaac
ctgcaactggtcgcgctcgaaagcgatgcgacgcgcgcgcggcgcatcggcgaaaacttg
cagcgcctgaagctccaggcggaagtgcgtattggcgacgcgggcacgccgtcgaaatgg
catgacgacatcgatcagccgttcgaccgcattctcgccgacgtgccgtgctcggcgtcg
ggcatcgtgcggcgtcatccggatattcgctggttgcgccgcgcctccgatattcccgcg
ctcgtcgacgaacagcggcgcattctcgacgcgctctggccgctcgtgaagccaggcggt
gaattgctctacgttacgtgctcgatctttcccgaagaaggcgagttgcaggcgcagtgg
tttggaaacaagcaccaggatgcggtacgattggacgcgccggggcaacttttacctacg
gtcgcccgcgcgcccgccgacacatcggccggttcccatgccggagaattcgctgacatc
agcgccggcgcgaactcagaccacgacggatttttctacgcgcgctttcagaaacggtga
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