Pyrobaculum calidifontis: Pcal_0584
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Entry
Pcal_0584 CDS
T00483
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pcal_0584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_0584
Transcription machinery [BR:
pcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pcal_0584
Prokaryotic type
Archaeal type
TFB
Pcal_0584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
Cyclin_N
Ribosomal_S27e
Prim_Zn_Ribbon
Desulfoferrod_N
FtrD-like
A2L_zn_ribbon
LysW-like_globular
Zn_Tnp_IS91
baeRF_family2
TFIIB_C_1
Lar_restr_allev
Auto_anti-p27
FYDLN_acid
Motif
Other DBs
NCBI-ProteinID:
ABO08011
UniProt:
A3MTP4
LinkDB
All DBs
Position
551063..552058
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AA seq
331 aa
AA seq
DB search
MSTATPPGKPLKFRIHRDSEGYLSLVSETGEVYSCPVCGNDKFVYNYERGEVVCIVCGTV
VQEQLLDLGPEWRAFTSEEKGQRARTGAPLTRLISEALTTVIDWRDRDVSGKELDIKRKL
EVIRLRKWQTRARVQTSYERNFIQAAQELERLKSSMGVPRPCVEQALEIYRQALEKELVR
GRSVEAMAAAALYMACRMLKMPRPLDELVRYTKASRREVARCYRLLLRELNVKVPISDPV
LYISRIAEQLKLSGEAIKLAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMLGDNKTQK
DFAVAAGVTEVTVRNRYKELAKALNIKVPIK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagctaccccgcccggcaagcccttaaaattccgtattcatcgagatagtgag
gggtatttaagccttgtctctgagacaggcgaggtatatagttgccccgtgtgtggaaac
gacaagtttgtctacaactacgagaggggggaggtggtgtgcatcgtatgtggcaccgtg
gttcaagagcagttgcttgacttagggcccgagtggagggccttcacctccgaggagaag
ggccagagggcccgtaccggcgcgccgttgacaaggctcatctcagaggctttaaccacg
gtgatagattggagagatagagatgtgtctggaaaagagctcgacataaagcgaaagctg
gaggttattaggcttagaaaatggcagacgagggcgagagttcaaacttcgtatgagcgc
aactttatccaagcggctcaggagcttgagagattaaagagctcaatgggcgtgccgagg
ccctgcgtagagcaggccttggagatttacaggcaagcacttgaaaaagagctggtacgg
ggcagatctgtagaggccatggccgcagcggcgttgtacatggcttgtcgtatgttaaaa
atgccgcgccctctcgatgaattggttagatatactaaggcctcgaggagagaagtagct
aggtgctaccgcctcctacttagagaacttaatgtaaaagttcccataagcgaccccgtg
ttgtacatatctagaattgcagagcaattaaagctcagcggcgaagcgataaaacttgcc
atagacattttacaaaaggcgaagaaggcgggtatcacggctgggaaagacccggcgggc
ctcgcggcagccgcggtctacatagcctcactaatgcttggcgataacaagacgcagaaa
gatttcgcggtggccgcaggcgtgaccgaggtcactgtgagaaaccgttacaaggagttg
gccaaggcgctcaatattaaagtgccaatcaaatag
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