KEGG   Pyrobaculum calidifontis: Pcal_1058
Entry
Pcal_1058         CDS       T00483                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pcl  Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:pcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcl03400]
    Pcal_1058
Enzymes [BR:pcl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pcal_1058
    5.6.2.6  RNA 3'-5' helicase
     Pcal_1058
DNA repair and recombination proteins [BR:pcl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pcal_1058
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc ResIII HypA HEM4 AAA_19
Other DBs
NCBI-ProteinID: ABO08483
UniProt: A3MV16
LinkDB
Position
complement(997140..999890)
AA seq 916 aa
MDRGSDVFAKLHPRVREAIYKLGYVEPTPAQREAIPKVLEGRHVLLIAPTGYGKTEAALF
PIFSKMVEGGGSGLRCLYITPLRSLNRDLLKRLESLAAELGFSIAVRHSDTPERERRIIA
SRPPDVLITTPESLQILLLNKRLRPALREVRYVVVDEVHELVNSKRGVQLAVGLERLVEL
AGEFQRVGLSATVGSPRLVAEYLGGGRPVEVVDVSGEKKYEVDVVLPTPSEEDYLDAERL
DATPEAVARIKKVAEYIKSARGRVLVFTNTRDGAEFLASRLKSLGVDVEVHHSSLAREHR
VAVEEKFKKGELKAVVATSSLELGIDIGEVELVVQYGSPRQVSKLVQRVGRSGHRLGLVS
RGIVVAADVEDLVESEEIVERALRGELEGEVEYHESALDVLLHQVVGIALEARIDGREIG
FEYLMGVLKRAHPYRNLTEGDLRLVLDFAERHGLLRGLRPRKGSVKYYFENVSTIPDEKS
YKAVDETTGRTVGELDREFVYSIEPGTKIVLSGRVWVFAKKEGDAVYLYPDYDVAGALPA
WVGEQIPVPFEVAQRACERRKELVISALRGEVDLPIDLEGLDIELVPGLSPVHVHVVSGR
YVVVHSCLGHKGNEALGLYLSHALSGYVGPVGYRADAYRVLLIFRDFFPAQAFDEVLRKP
HSFVYKTLQNAVKSSKLFRYRFLQVAKRAGVISKDAEEIPQRLVDVYVDDLPGIEAVNEI
FVERLDVRALFSFLERATEGGYVVKRLAKPTALEKPILEEALRLDFSFRGLSRETLADLV
RKRILNKPVTLLCINCGWTLTTKAVALPEDVFCQNCGMRVLAVVKGIDLAKARQVLSKLK
IRQRLSPEERKVAEYLQQSASIVLQHGKLGVLVQLAHGVGPKTAVKILNKVVEGGDLWSA
VLEAERQYASTKAFWD
NT seq 2751 nt   +upstreamnt  +downstreamnt
gtggataggggctcggacgtttttgctaagctccacccccgtgttagagaggctatctac
aagttgggctatgttgagccgacgcctgcgcagagggaggctattcccaaggtcttggag
gggcgccacgtattgttgattgcccctacgggttatgggaagacggaggcggcgcttttt
cccatcttctctaagatggtggagggcggggggtctgggcttcgttgtctctacataact
cctctcaggtctcttaacagggacttgcttaagcggctggagagtttagccgcggagttg
gggttttccatagctgtgcggcacagcgatacgccggagcgggagaggcgtatcatagcc
tctaggccgcctgatgtcctcatcaccacgcctgagtctcttcaaattcttttgcttaac
aagcggcttaggcccgcgctgagggaggtccgatacgtggtggtcgacgaagttcacgag
cttgtgaacagcaagaggggggtccagctcgccgttgggctcgagagacttgtggaactc
gcgggggagtttcagcgtgtgggcctctccgccacggtgggctcgccccggctggttgct
gagtacttgggcggggggaggccagtggaggtggtggacgtgtctggggagaagaagtac
gaggtggacgtagttctgcctacgccctctgaggaggactacctcgacgcagagcggctc
gacgccacgccagaggctgtggccaggattaagaaggtggcggagtatattaagtcggcg
aggggcagagttctcgtttttacaaacactagagatggggcagagttcctcgcctctagg
ctgaagtcgctcggcgtagatgtggaggtgcaccactcctctcttgccagagagcataga
gtagccgtggaggagaagttcaagaagggggagctcaaggcggtcgtagctacctccagc
ttggagctggggattgacataggcgaagtggagctggtggtccagtatggatcgcctagg
caagtctctaagctggtgcagagagttgggcgtagtggccataggcttggcctcgtctct
agggggattgtcgtggcggcagatgtggaggacttggtggagtctgaggagattgtggag
agggctcttcggggggagctggagggagaggtagagtatcacgaaagcgccctcgacgtg
cttctacaccaagtggtgggcatagcccttgaggctaggatagatgggcgagagatcggc
tttgagtatttgatgggggttttgaagagagctcacccatacagaaatctcacggagggt
gatctccgccttgtcttagattttgccgaacgccatgggctactgagggggctgaggcct
aggaaggggagcgtcaagtactactttgaaaacgtgtccacaatacccgacgaaaagagc
tacaaggccgtcgacgagactacggggagaactgtcggcgaacttgacagagagtttgtc
tactcaatcgagcccgggactaagattgtcctctctggcagagtgtgggttttcgccaag
aaggagggcgatgcggtctatctatacccggactacgacgtggcgggggctctccccgcc
tgggtgggggagcagatacctgtgcccttcgaggttgcccagagggcttgtgagcgtagg
aaggagctcgttatatctgcgctccgtggcgaggtggacttgcccatagacttggagggt
ttggacatagagctcgtgccggggctcagcccggtgcatgtgcacgtagttagtggcagg
tatgtagttgtacatagttgcctgggtcataagggtaacgaggccttggggctctacctc
tcccatgccttgtctggctatgtgggaccagtgggctatagggcagatgcgtatagggtg
ctcttgatttttagggacttcttcccagcgcaggcatttgacgaggttttaagaaagccc
catagctttgtctataagacgttgcaaaacgctgtgaagagctctaagctgtttagatat
aggtttctccaggtagctaagcgggccggtgttatttctaaagacgccgaggagattcca
cagagactcgtagacgtatatgtagacgacttgccgggaatagaggccgtgaacgagata
tttgtggagcggctcgacgtgagggccttgttttctttcctagagagggctacggagggg
ggctacgtggttaagaggctggccaagcccactgccctggagaagccaatactggaagag
gcgttgcgtctggatttctcgtttagaggactctcaagggagacgctggcagacctagtg
cggaagaggattttgaacaaacctgtgacacttctttgcataaactgcggctggactctt
acgactaaggcagttgccctcccagaggacgtgttttgccaaaactgcggcatgagggtc
ttggccgtggttaagggaattgacttggccaaggctaggcaagtattaagcaagcttaag
atacgccagagactgtcgcccgaggagaggaaggtggcggagtatttgcaacagagcgcc
tccattgttctccaacatggtaaacttggcgtgttggttcaactggcccatggagtgggg
ccaaagaccgccgttaagatactcaacaaggtcgtagaggggggagatctctggagcgcc
gtcttggaggcagaaaggcagtacgcttctaccaaggctttttgggactag

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