Procambarus clarkii (red swamp crayfish): 123763950
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Entry
123763950 CDS
T07930
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123763950
09124 Replication and repair
03420 Nucleotide excision repair
123763950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123763950
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123763950
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123763950
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123763950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
123763950
NCBI-ProteinID:
XP_045607249
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All DBs
Position
LG38:4173727..4194439
Genome browser
AA seq
465 aa
AA seq
DB search
MMAFGTQTLTCKNLQEYLRSLAKDTLDRLYRHPATCLAVYRELPELSRQFVLRLLFVVKP
VPQMLLATWIPQHEPGRELGDIAAEHRQGTQVLLDMYIWQEVKDHQGNMAIKLNNTFREN
LKVAVLGGGKPWTMSAALDSDPHQRDVEFLDKYAMDRWESVLQFLVQPGQGQTAISRDAM
RTLLHAGLIESSDESDNMQITSSGFQFLLLDTASQVWFFILKYLETVTERGLSLVSCLTF
LFKLSFSTLGKDYSMEGMDNELLTFLQHLREFGLVYLRKRSSGRFYPTRLALNITAGQNK
GIIDVPKHGYLVIETNYRIYAYTVSELQIALLSIFTDIEGRFPNMVVASISRGSVRRALL
KGIGAEQIISFLRQHCHPQMFKNNPVVPRTVADQIKLWELERERLEFSEGVLYKDFMSVH
DFLLLSNYASSKGVLIYSDEKQRTVVVTKKGHPNIKQFWKEAQAR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatggccttcggcacacagacattgacttgtaaaaacctgcaggagtacctgaggtcc
ctggcgaaggacacactagacagactgtaccgacaccctgccacttgcctggccgtctac
agggaacttccagaattgagtcggcaatttgttttgaggctcttgtttgtggtgaaacct
gttcctcaaatgttgttggccacatggatacctcagcatgaaccaggcagagagcttggt
gacatagctgctgagcatcgacaagggacgcaagtcctgctggacatgtacatatggcag
gaggtgaaggaccaccaaggaaatatggccatcaaactcaacaacacttttagagaaaat
ctcaaagtggcagttcttggaggtggaaaaccatggactatgtctgctgctctagactcc
gatccacatcaacgagatgttgagtttttagataaatatgcaatggatagatgggaaagt
gttctacagtttctcgtgcagcctggacagggtcagacagccatctccagagatgccatg
cgcacattacttcatgcaggtcttattgaaagcagtgatgagtcagacaatatgcaaata
acaagctcaggcttccagtttcttcttcttgacacagcttcacaagtttggttcttcatc
ctgaaatacttggaaactgttacagaacgtggtcttagccttgtgtcatgtctcacattt
ctctttaagctgtctttctcaactcttggtaaggattacagcatggaaggaatggataat
gagctactaaccttcctccaacatcttcgggaatttggtctcgtgtacctgcgcaaacgt
agttctggaagattttatcccacaagattagcactcaacatcactgctgggcagaataag
ggcatcattgacgtgcctaaacatggttatctggtgattgaaacaaattacagaatatac
gcttatactgtctccgaactccaaatagcacttctgtctatttttacagatatagagggc
agattccccaacatggtggttgcaagcatctcacgtggcagcgtgcgccgtgctctcttg
aagggtattggggctgagcaaattataagcttcctgcgacagcattgtcacccgcagatg
ttcaagaacaacccagtagttccgcgtactgtggcagaccagataaaactgtgggaatta
gaaagagagcgtttagaattcagtgaaggtgtcctctacaaagattttatgtctgttcat
gattttttgctcttatccaactatgcatctagtaagggtgtgcttatatactctgatgaa
aagcaaaggacagtggtggtgaccaaaaaaggacatccgaacattaagcagttctggaag
gaagcacaagcaaggtaa
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