Procambarus clarkii (red swamp crayfish): 123774768
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Entry
123774768 CDS
T07930
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcla01002
]
123774768
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123774768
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123774768
Peptidases and inhibitors [BR:
pcla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123774768
Ubiquitin system [BR:
pcla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123774768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
PB1
Motif
Other DBs
NCBI-GeneID:
123774768
NCBI-ProteinID:
XP_045625353
LinkDB
All DBs
Position
LG01:9730058..9899859
Genome browser
AA seq
2085 aa
AA seq
DB search
MMASLHNTTTSLPLTTTTTTPHHHSPSISRSISPNPSSRSSSSRSSSSSSSSSSSSSSNS
SRCPSSARGISSTATYIPLDPLLETLRLRLLRVIMKQADSVEDGGGGDGGGGGGGGGGGG
GDGTSVEEKQEVTTNLQVKVDAQASHTTTFSDTSTETSMKTTTSKLTRTTKVKTIKIVKK
KTTSSLIANAISDLNSKAEEPLTLVGESPKKVLIKRSIDTPPRKIPGIPKKIIKPVRCQE
VLEGGAEATASVPSPKRGESNKTKETSKVDITNETKVVSDAKKSVVQHSVEKAAVEVNHS
VETSDSDEIKTSAKANSSDKIENLIEIKALPETNDSIKINNEVKSRESLEVKSSKHKNST
ESLDSVAHKNISKASDSARPKDSTEINKSFSTKANDLVKIEESVKENDPVKSKESVKEND
PIKSKESVKENDPVKSKESVKENDSVKSKESVKENDPVKNKESMKGIDAVSSKDCIKSND
SIVSKQNNTCTVVSVRSKDYTERNDTVKSNDPIKADNSIKLEISSEKSEVVKPKETVVKN
NLAKSKDCVQPECSTAKETSIDTLTTKTDTPDETASSVKVKSTKAKKSTKVVSSVRSTDS
LSAVDSATVMPAKASECSKTVDNVKEDELGATNNIQNEVDSDKAIENSDYADKDVVNDIS
SLSEETNVSSCSNEKTKFADADSLLDSELDNVSVFVIVRDMSGLTATVNKVTIVTPATST
CGELMQEVGRRFKYEPDSFSLVLQCSDGDQVEVDKMEAERTLADARFQVEGTPRNSLILC
DLGGHPPRRTDDDDLSLGASASPTANATERKWFDRSNNYDNTPEYSYPSALIKHETVGFV
YTTGYVGLVNQAMTCYLNSLLQTLYMTPEFRNAIYQWEFKGCEEEASKNIPCQIQRLFLL
LQTTNKSAVETTNLTRSFGWDSSEAWQQHDIQELCRVMFDALEQCFKNTHQSNLINDLYE
GKMKDYVKCLQCGIEGAREDTYLDIPLPIRPFGSSSAYKSVEEALRAFVEPELLTGNNKY
KCSKCDTLCDAHKGLKFTRFPYLLTIHLMRFDFDYQTLHRIKLNDKVTFPNILDLNYFIE
NTNKEDGSVSTTAVTPEKSSADKVDDASTTDSGSALDVEDSSVENTSNSQPESDNQDEDE
GIDVSSMYNEKNKTWLTNGPYVYELFSIMIHSGSASGGHYYAYIKDFATGEWFCFNDQSV
TKITYDDIRKTYGGNTSRGGYYSSWSSSANAYMLMYRQITKDRNVDAFTREQLPQHIKDL
VQRMTEEEAAEREQRELERCTCRIKLFCQPPGQSQMVEKKLRVHKDSTLRETTKLAHKEL
GLENVVPLERCRLVKYEEFHNSLECSFEGQEDELISEVLGGVRNSYKFDLLMEIRDEDKT
FEVYKPGGTTIKAHVVNLTTEEVEGPCNLRGSLSMTVRELKELLGRSLNLNPDTMRIVLE
RYYNDLRPLTPDTKTLKTEGFYRSNKVYVEASGAEPNDFFTGSCMYCILDRYENTITLYC
PLPDTSKEALEELQIPAYKEEEVDPSGGESSSNNSGSCSGVASMSSAASPAESAASPASC
SSKDSGISSKAPTESSSSETESSSNSSIVSPSGPCTSSLSTSSTIPASSPGSSSMQGSVG
GMPGATATTPTAFPTTTGNGSDGEDEGIADADSGASSSNVNSDQSASEDSSLTSDSDRTL
VGDPPEDKLSDASNSPDYRNVSSPEDNGTETKGDDSGWGLPIFQDNEVVWGEDEKEVEVK
RYFRAEYFTEEDTKQKMLRVYVDKRITVGQLKAEMQRWVGVSHEHFKLFKIYSNSQEFEC
TRMTETLASYGDNTRLSVRLGRALLPGEQRGKVYMLEPDNIDDPARFLIDWVICKGDTVA
NAKKAIIKEVNTRCNMTLVPENVRMRKKSWKNPQTIYLDNQKFDDDINLYSNWEMFLQII
EGPETRTSSTEELAIFVKRWRPSTYTTDRLTEIIIPRSTVDGLKEKLSEISGIEAENIEV
AKGKGTFPSDMSVIDITNDLDWAPRSGPLDQRPFYILDDGAMIYYRDKTEKLKELLEDER
RELVNTENRRLNREQQYTCPSSSTSTYSTLRSKEKGLKIYLNHED
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtccctacacaacacaaccaccagcttgccgctgaccaccaccacaaccaca
ccacaccaccacagtcccagcatcagtcgcagtatcagtccgaatcccagcagcaggagc
agcagcagcaggagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagc
agcaggtgccccagctcagcaagggggatctccagcaccgcgacgtacatccccctagat
cctcttctggaaaccctgcgtctccggttactcagagttataatgaagcaggctgatagt
gtagaagatggtggcggtggagatggggggggaggaggaggaggaggaggtggtggcggc
ggtgacggaacaagtgttgaagaaaaacaagaagtcacaactaacctgcaggtcaaggtt
gatgctcaagcctcgcacaccaccaccttcagtgacaccagtactgaaacctctatgaag
actaccaccagcaagttaaccaggactacaaaagtcaagacaataaaaattgtcaagaag
aagacaacaagctctctgatagccaatgccatctcagatctcaatagtaaggctgaagaa
ccactcactttagttggagagtcacccaagaaagtattaataaaaagaagtattgacact
cctcccagaaaaatccctggcattccaaagaaaataattaagcctgttaggtgccaggaa
gtgctagagggaggtgctgaagctactgcatcggtcccttcaccaaaaaggggagaatca
aataaaactaaagaaacaagcaaggttgatattaccaatgaaacaaaggttgtcagtgat
gctaaaaaatcagttgttcagcattctgtggaaaaagcagcagtggaagtgaatcattca
gttgaaacatcagacagtgatgaaataaaaacatcagctaaagcaaactcttctgataaa
attgaaaatttgattgaaattaaagcattacctgaaactaatgattctataaaaataaac
aatgaagtaaaatcaagggaatcattagaagttaagtcatccaaacataaaaactcaact
gaatcacttgattctgttgcacataaaaacatctctaaagccagtgattcagctaggcct
aaggactccactgaaataaataaatcattttccacaaaagcaaatgatttggtaaaaatt
gaagaatctgtgaaagaaaatgatccagtaaagagtaaagaatccgtgaaagaaaatgat
ccaattaagagtaaagaatccgtgaaagaaaatgatccagtaaagagtaaagaatctgtg
aaagaaaatgattcagtaaaaagtaaagaatctgtgaaagaaaatgatccagtaaagaat
aaagaatccatgaaaggaattgatgctgttagctcaaaagattgtataaaatcaaatgat
tcaattgtatctaaacaaaacaatacttgtacagttgtttcagtcagatctaaagactat
actgaaagaaatgatactgtcaaatctaatgatccaattaaagcagacaattcaatcaaa
ttagagatctcctctgaaaaaagtgaagtcgtaaaacctaaagaaaccgttgtaaaaaat
aatttggctaaatcaaaagactgtgttcaaccagagtgttctacagcaaaagaaaccagc
attgatactcttaccactaaaactgatacccctgacgagactgctagttcggtaaaagtt
aaatcaacaaaagcaaaaaaatctaccaaggttgtaagttctgtgagaagcacagactct
ttgagtgccgtagactctgcaacggtgatgcctgcaaaagccagtgagtgttcaaaaact
gtagataatgtaaaggaggatgaattgggtgccacaaataacatacaaaatgaagtagac
tctgacaaagcaattgaaaatagtgattatgcagataaggatgtagtgaatgatatttct
agtttgagtgaagaaacaaatgtgagctcgtgtagtaatgaaaagaccaaatttgctgat
gccgattctttgttggattcggaactagacaatgttagtgtgtttgttattgtccgtgat
atgagtggcctaacagccacagtaaataaggtgacaatagttacgcctgccacatccaca
tgtggtgaattaatgcaagaagttggccgccgttttaaatatgaacctgactccttctcg
ctggttctacagtgctctgatggtgatcaggtagaagtggacaaaatggaggctgaacgc
acattggcagatgctaggtttcaagttgaaggtacgccacggaacagcctaatactatgt
gatcttggtggtcatcctccacggcgaacagatgatgatgatcttagcctcggggcctcg
gcatctcccacagctaatgctacagaaagaaagtggtttgaccgaagcaataattatgat
aacacaccagagtattcttatccttctgcattgattaagcatgaaacagtagggtttgtg
tatactacaggttatgtgggactggtgaaccaggcaatgacttgttacctaaacagcctc
ctgcagacactgtacatgacaccagagttccgcaatgcaatctatcaatgggagtttaaa
ggctgtgaggaagaagcttcaaaaaatattccgtgccagatacaaagactttttcttcta
ctacagacaacaaataagagtgcagtagagacgaccaacctcacccggagttttgggtgg
gacagcagtgaggcgtggcagcagcatgacattcaggaattgtgcagagtgatgtttgat
gcccttgaacagtgctttaaaaatacccatcagtccaacctcatcaatgatctttatgaa
ggcaagatgaaggactatgttaagtgcctccagtgtggtattgaaggagctagagaagac
acatatttagatattcctcttcccatcagaccatttggctccagttcggcatacaagagt
gtggaagaagctctaagggcttttgtggagcctgagttgctcacaggaaacaacaaatac
aaatgctcaaaatgtgatactctgtgcgatgctcacaaaggtctcaagtttacccgcttc
ccgtacctgcttaccatacacctcatgcggtttgactttgactaccaaacattgcataga
ataaaactcaatgataaagtcacattcccaaatatcctggacttaaattacttcattgag
aatacgaacaaagaagatggaagtgtatcgactacagctgtcacaccagagaagtcttca
gcagataaagttgatgatgcatccaccacagactctggctctgcactggatgtagaagac
agttctgttgagaatacttcaaattcccagcctgaatctgataatcaggatgaagatgag
ggaatagatgtgagcagtatgtacaatgagaagaacaagacctggttgacgaatggccct
tatgtctacgagctcttctcaatcatgattcactcgggcagtgcatcaggtggccattat
tacgcttacattaaggactttgcaacaggggagtggttctgcttcaatgaccaaagtgta
accaagattacatatgatgacatcagaaagacatatggtggcaacacttcaagaggaggt
tactactccagctggagctccagtgctaatgcttacatgctcatgtacagacaaatcaca
aaggacagaaatgttgatgcctttacccgggagcaactcccacaacatatcaaggactta
gtacaaagaatgacagaagaagaagcagcagagagagaacagcgagagctcgagagatgt
acatgtcgcatcaagctattctgccagccccccggccaaagtcagatggtggagaagaaa
ctcagagttcacaaggactccactctcagggaaaccaccaaactggctcataaggagttg
gggttagaaaatgttgttcctctagaaagatgtcgtctggtcaagtatgaggaatttcac
aacagtttagagtgctcgtttgagggtcaagaggatgagctcatatctgaagttcttgga
ggtgtgaggaattcatacaagtttgatcttttgatggaaattcgtgatgaagacaaaaca
tttgaagtttataagcctggaggtacaacaataaaggcccatgtggtgaacttgacaaca
gaagaggtggagggaccatgtaacttgagagggagcctcagcatgactgtacgtgagctg
aaggaactactaggtcgttctctcaacctaaatcctgacacaatgaggattgtgttagaa
cgttactacaacgatttgagaccgctcaccccagacaccaagactctgaagaccgagggt
ttctatagatcaaacaaggtgtatgttgaggcatctggtgctgagcctaatgacttcttc
actggatcttgcatgtactgcatcctagaccgttacgaaaacaccatcacactctactgc
cctctcccagacactagtaaagaagcgttagaagaacttcaaattccagcctacaaagag
gaagaggtagatccatcaggaggtgagagcagcagcaacaacagtggtagttgtagtggt
gttgcatccatgtcttctgctgcctcccctgctgagagtgctgccagccctgccagctgc
tctagcaaggacagtgggattagcagcaaagctccgactgaatcctccagtagcgagact
gaaagtagcagcaatagctcaattgtcagtccatcgggaccttgtacttcatcactgtca
acttcatcaactatacctgccagcagtccaggatcatcttccatgcagggaagtgttggt
ggaatgccaggcgccacggccaccactccaaccgccttccccaccaccaccggcaatggc
agtgatggagaggatgaggggattgctgatgctgacagtggtgccagttcatccaatgtc
aacagtgaccagagtgccagtgaagattcttcccttaccagtgatagtgacagaacacta
gtaggagaccctccagaggacaaactttctgatgctagcaattcgccagactacagaaat
gtgtcatcacctgaagacaatggcaccgagacgaagggagatgactctggttggggttta
cctattttccaggacaatgaggtagtctggggagaggatgagaaggaagtggaggtcaag
cggtacttcagagcagagtatttcacagaagaggacactaaacaaaaaatgctacgggtt
tatgtagataaaaggataacggttggccagctgaaggccgaaatgcaacggtgggtaggg
gtgtctcatgaacacttcaaactcttcaaaatatactccaacagccaagaatttgagtgc
actagaatgactgaaactttagcctcgtatggtgacaacaccagattaagtgtgaggctg
ggaagagcactgctgcctggcgaacaaagagggaaagtttacatgcttgagccagacaat
attgatgatcctgctcgattcctcatagattgggttatatgcaagggtgacactgttgcc
aatgccaagaaggccatcataaaagaagtaaatacacgatgtaacatgactcttgtccca
gaaaatgtgagaatgcggaaaaagagttggaagaacccccagacaatatacctcgacaat
caaaagtttgacgacgacatcaatttgtactcaaactgggaaatgttcctccagattata
gagggaccagagactagaacaagcagcactgaagaattagcaatttttgtgaagagatgg
agaccatcaacctatactactgaccggctcactgagatcattatacctaggtcaactgtt
gatggccttaaggaaaagttgtctgaaatatctggaatagaagcagagaatattgaagtt
gccaagggcaaaggaacatttccatctgatatgtctgttattgatataaccaatgaccta
gattgggctcctcgcagtggcccgttggaccagcggccattttacattctagatgatggt
gctatgatttattacagggataagactgaaaagctgaaggaactattggaagatgaacgt
cgggagcttgtgaacactgagaaccgccgcctcaaccgtgaacagcagtacacctgtcca
agttcctcaacttctacctatagtactctaagatccaaagaaaagggactcaaaatttat
ctaaatcatgaagattaa
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integrated database retrieval system
