Procambarus clarkii (red swamp crayfish): 123775298
Help
Entry
123775298 CDS
T07930
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123775298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123775298
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123775298
Spliceosome [BR:
pcla03041
]
Complex A
U2 snRNP components
U2 related factors
123775298
Complex B
123775298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123775298
NCBI-ProteinID:
XP_045626283
LinkDB
All DBs
Position
LG82:3326183..3371799
Genome browser
AA seq
1053 aa
AA seq
DB search
MSRDSRRRRSRSRSRTPDRRRSRSRDRDRDRDRDRDRGRSRRSRSRDRHRSRSRERRRSR
SRDRRSRSRDRSRSRERDRDRRSRSRDRDRKRSRSRSRDRDRKRSKRSKSHSPAKVKPVA
HPPKPQEPLPAEPKDEEETGLDFDPSKVDKEEAEKRLEAEMQKRRERIEKWRAEKKKREL
EAAKKEAEKGTLGANVPKVSIKAWSLEDDEEEEEGENKEGDGKPEEEDEVDPLDAFMSGI
QEEVRKINRVDIRGGVRRGVKTSVFGNEAGGMKKPVIIVGMAKKVNAKKKGELMEQNQDA
LEYSSEEEGEDLKDTMASINSKGKKELVKVDHTTIDYVPFRKDFYVEVPEIANMSKEDVD
AYRAELEGIKVKGQGCPKPIKTWAQCGVSKRILDVLKKSNYEKPTPIQVQAIPAIMKGRD
VIGIAKTGSGKTLAFLLPMFRHIVDQPPLEDTDGPIAIIMTPTRELCMQIGKECKKFAKN
NLRVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLRRVTYVVLDEAD
RMFDLGFEPQVMRIIENIQPARQTVMFSATFPRQVEALAKKILTKPIEIMVGGRSVVCRD
VTQEVVLLDEDQKFLKLLEILGQFYERGQTIVFVDKQENADSLFKDLLSHSYRALVLHGG
VDQIDRDSTMLDFKAGRVPIMVATSVAARGLDVKQLILVVNFDCPNHYEDYVHRCGRTGR
AGNKGWAYTFLTQDQPRYAGEIIRAMELSETPVPTDLQKFYDEYKQKMEGEGKKVKTGGG
FHGKGYKFDESEANFASEKKKFEKAALGLADSDDEDIEQDIDQQIESMLNTKRTVKEIKV
AFTFRQAPDVSSTQGDSMSGISLGGPSASDKLELARKLAQRINLQHNIGKEAKGASQQAA
EFILKGGAAMQPTISAKTVAEQMAQKLNNKLNYQPRDDQEEEEETAEETHHKYEEELEIN
DFPQQARWRVTSKEALAQISEYSEAGITVRGTFCPAGKNPPEGERKLFLAIESTSELAVS
KAKAEIIRLIREELVKLRTSAGPVKAQGRYKVL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgagatagcaggcgcaggaggtctcgtagccgttctcggactccagaccgcaga
agatcacgatcccgagacagggatagggatagagatagagacagggatcgaggcagatcc
cgtcgatcccgatccagagaccgccacaggtcacgcagcagagagaggaggaggtcaaga
tcccgtgatagacgctcaagatcaagagacagatcgagatctcgagaaagagatagggat
aggaggtcaagatctcgtgatagagacaggaagaggagtaggagcagatcacgagacaga
gacagaaagaggagcaagaggagcaagtcacactctccagccaaagtcaaacctgtcgcc
catcctccaaagcctcaagaaccattgcctgcagaacccaaggatgaggaggagacgggt
cttgactttgatccctccaaagtagataaggaagaggcagaaaaacgccttgaagctgaa
atgcaaaaaagaagagagcgtattgagaagtggagagcagagaaaaagaaacgggaattg
gaagcagccaagaaggaagcagagaaaggaacgttaggagccaatgtgccaaaagtctca
ataaaagcctggagtctagaggatgatgaggaagaggaagaaggcgagaacaaagagggt
gatggtaaaccggaagaggaagatgaagttgacccactcgatgcatttatgtcaggcatt
caggaagaagttcgaaaaataaatcgtgtagacattcgaggaggtgtgagacgtggagtg
aaaacaagtgtatttggaaatgaagctgggggaatgaagaagccagttattattgtagga
atggcaaagaaagttaatgctaagaagaaaggagagttaatggaacaaaaccaagatgca
ttagaatattcatctgaggaagagggagaagatctcaaagacaccatggcaagcatcaac
tctaaaggaaagaaggagttggtgaaggttgaccacacaaccatcgattatgtgcccttc
aggaaggacttctatgtggaagtgccagagattgcaaatatgagcaaagaggatgtggac
gcatacagagcggagttggaaggcatcaaggtgaaaggtcagggatgtcccaaaccaatc
aaaacctgggctcagtgtggagtgagtaagaggatcctggatgtgctgaagaagagtaat
tatgagaaaccaacaccaattcaagtgcaggctatacccgcaatcatgaaaggaagggat
gttattggaattgccaagactggatcaggaaaaactctggcatttcttttgccaatgttt
cgtcatattgtggatcaaccgcctttagaggacacagatggccctattgccattattatg
acaccaacacgagagctctgcatgcaaattggtaaagaatgtaaaaaatttgcaaaaaac
aatttgagagtatgctgtgtctatggtggtacaggaatatccgagcaaatagctgagctc
aaaagaggagctgaaatcattgtgtgtactcctggacgaatgattgacatgttagctgca
aatggtggaagagtcaccaatcttcgcagagtcacgtatgttgtactagatgaagctgat
cgtatgtttgacttgggatttgagccacaggtaatgagaataatagaaaatattcagcca
gcccgtcagacggtcatgttttcagccacattcccacgacaagtagaagctctagctaaa
aaaatacttacaaaaccgattgaaatcatggttggaggaagatctgttgtgtgcagagat
gtcacacaggaggttgtccttcttgacgaagatcagaaattcctgaagttattagagatc
cttggccagttttatgagcgtggtcagacaattgtctttgttgataagcaagaaaatgct
gactctttgtttaaggacttgctcagccattcataccgggctttagttcttcatggagga
gtagaccaaatagatcgagatagtacaatgttggatttcaaagctggaagagtacccatc
atggtggctacttcggttgctgctcgaggtctggacgtcaaacagcttattttggtggtc
aactttgattgccccaatcattatgaggattatgttcataggtgtggtcgtactggccgt
gctggcaacaaagggtgggcttataccttcctaactcaagatcagcctcgttatgcagga
gaaattattcgtgccatggaattgtctgagaccccagttcctactgatcttcaaaaattc
tatgatgaatataagcagaaaatggaaggagaggggaaaaaagtgaaaaccggcgggggt
ttccatggcaaaggctacaagtttgatgaatctgaggcaaactttgcctcggagaagaag
aaatttgaaaaagctgccctgggtcttgccgactctgatgacgaggacattgagcaggac
attgaccagcagattgagagtatgctaaacacaaagaggacagtcaaggaaattaaggtg
gctttcacatttcgacaggctcctgacgtgtcttcaacgcaaggggatagcatgtcgggc
atctccctcggtggtccttctgcctccgacaagttggaactggctcgtaaattggctcag
cgcatcaatcttcaacataacattggcaaggaggccaaaggtgccagtcagcaggctgca
gagtttattctcaagggcggagcagctatgcaacccaccatatctgccaagactgttgca
gaacagatggcacaaaaattgaataataagttgaactatcagccccgtgatgatcaagag
gaggaggaagagactgcagaagagactcatcacaagtatgaggaagaacttgaaattaat
gacttcccacagcaagctaggtggcgagtaacgagtaaggaagctctggcccaaatctct
gaatattccgaagctggaataacagtaagaggaacattctgtccagcgggtaaaaatccg
cccgaaggggagcgcaaactcttcttagctattgaatctacatccgagttagctgtgtct
aaagcgaaagctgaaatcattcgattaatacgtgaagaacttgtgaaactgagaactagt
gcaggtcctgtaaaggctcaaggaagatacaaggttctttag
DBGET
integrated database retrieval system