Paraprevotella clara: PC1C4_23030
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Entry
PC1C4_23030 CDS
T08732
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pclr
Paraprevotella clara
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pclr03009
]
PC1C4_23030
03016 Transfer RNA biogenesis [BR:
pclr03016
]
PC1C4_23030
Enzymes [BR:
pclr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
PC1C4_23030
5.4.99.29 23S rRNA pseudouridine746 synthase
PC1C4_23030
Ribosome biogenesis [BR:
pclr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PC1C4_23030
Transfer RNA biogenesis [BR:
pclr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
PC1C4_23030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDI75581
LinkDB
All DBs
Position
3173994..3175628
Genome browser
AA seq
544 aa
AA seq
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MEKNTTPFHPFIPDADASELPRLFTCPFHYKPHPLSVRAAEDVRRYLTLRTDWKTELDKG
KMFGVLVVQKEGRTGFLAAYSGILCGRNDHDFFVPPVFDLLQPDGVFKTEEAQISQINHR
IEALEHSDLRASLLQQAADRKAAGEQALKEARDALKEAKRQRDLLRASDHNDFTEEQLTR
ESRFLKAEYKRLEKQWKAKLEEVETALKRSDEEIEALKTERKRRSVLLQNRLFAQFRMLN
ARGEEKDLWQIFREHGRPVPPSGAGECAAPKLLQYAYRHGYRPLTMAEFWWGASPETEIR
KHGYYYPACKSKCEPILGHMLQGLDVEPNAHENSKHLDHEPELVYEDEWMAAVNKPAGML
SVPGKGDAPSVWSWARAHFPEATGPLLVHRLDMDTSGVLLIAKDPETHRKLQQLFETRHI
KKRYIALLDGTVTDDEGFIRLPLCPNPDDRPRQMVSTAYGKAAVTRFEVLSRSHGQTRVA
FYPFTGRTHQLRVHAAHPEGLDTPIVGDNLYGRRASRLFLHAETVAFRHFKTGRWVSITA
PAPF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaataccacacctttccatcccttcatcccagacgcagacgcctccgagctt
ccacgcctgtttacctgtccgttccactacaaaccgcaccctttatccgtacgcgcagcc
gaagatgtgcgccgctatctcacactccgcaccgactggaaaacggaactggacaaagga
aaaatgttcggcgtattagtcgtgcaaaaagaaggaaggacgggctttttagcggcttat
tccggtatactttgcggacgcaacgaccacgactttttcgtaccgcccgttttcgacctg
ttgcaaccggacggtgttttcaagacagaagaagcgcaaatatcccaaataaaccaccgt
atcgaagcgttggaacacagcgacttgcgtgcctcgctgctccaacaggcagccgacaga
aaagcagccggagaacaggcattgaaggaagcccgcgacgcattgaaagaagccaaacgg
caaagggacttgttacgggcatcagaccacaacgacttcacggaagaacagctcacccgt
gaaagccggttcctgaaagctgaatacaaacggttggaaaagcaatggaaagccaaactc
gaagaggtcgaaaccgccctgaaacggtctgacgaagaaatagaggcgctgaaaaccgaa
cggaaacgccgctccgtcctgctgcaaaatcggcttttcgcccaattccgcatgctgaac
gcacggggggaggagaaagacctgtggcaaattttccgggaacacgggcgacccgtaccg
ccatcgggtgccggagagtgtgccgctcccaaattgctgcaatatgcctaccgtcacggc
tatcgtcctttgaccatggccgaattctggtggggggcttcaccggaaacggaaatacgc
aagcacggctactactatccggcatgcaaaagcaaatgtgagccgatactcggccacatg
ttacagggtctggatgtggaacccaacgcacatgaaaacagcaagcatctcgaccacgag
ccggaactcgtctacgaagacgaatggatggctgctgtcaataaaccggccggcatgctt
tccgtacccggcaagggcgatgccccttccgtatggagctgggcgcgtgcgcattttccc
gaggccacgggaccgctcttggtgcaccgtctggacatggacacctcgggagtgctcctc
atcgccaaagacccggaaacgcaccgaaagttgcaacaactgtttgaaacgcggcacatc
aaaaaaagatacatagctttgctcgacggcacggtaacggacgacgaaggctttatccgt
cttcccctctgccccaacccggacgaccgtccacggcaaatggtgagcacggcatacggc
aaagccgccgtcacgcgctttgaggtcttgtcgcgcagccacggccaaacccgcgtggcc
ttctatcccttcacggggcgtacccaccagttgcgggtgcatgccgcccatccggaagga
ttggacacccccatcgtaggcgacaacctgtatggccgtcgagcctcccgcctcttcctg
catgccgagaccgtggccttccgccatttcaagaccggacgttgggtcagcattacggca
cctgccccattctga
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