Pedobacter cryoconitis: AY601_1570
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Entry
AY601_1570 CDS
T04341
Name
(GenBank) Putative Histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_1570
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcm01001
]
AY601_1570
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcm02022
]
AY601_1570
Enzymes [BR:
pcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AY601_1570
Protein kinases [BR:
pcm01001
]
Histidine kinases
OmpR family
AY601_1570
Two-component system [BR:
pcm02022
]
OmpR family
VicK-VicR (cell wall metabolism)
AY601_1570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_3
HATPase_c
PAS_4
HisKA
PAS_8
PAS_10
MEKHLA
PAS_11
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AMP98485
UniProt:
A0A127VB22
LinkDB
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Position
complement(1813938..1815815)
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AA seq
625 aa
AA seq
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MEDFEVLQAKIAQYEKENKELKFRLEELNDFVENASLPLHWVNAEGIITWANQAEFVSLG
YTREEYIGFPISNFHEDQEVIQDILYRLTNNQTLLNYPARLRCKNGDIKHVLINSSVLWK
EDKFVHTRCFTRDITPLIQEQERKAELINELEQNETKLKIAIESTNLGTWEWDPITNILY
WSEECRNFFGYPAAEQITFDAFSEMIHPGDRSTVLLAMHESIEPGNGKTHNLTYRIYRLD
NNEMRWIKVQWRSSFKTDRYASLLIGTTLDITDVKYAEEKSEKLAAIVNSSNDAVISKTL
NGIITSWNDSAERTFGYSAAEVIGEPILKLIPPDRQEEEVQILSRLNKGERVDHFETKRI
TKSGKTIDVSLTISPVKDMDGKIIGLSKIARDITERKQEEQRKNDFVAMVSHELKTPLTA
LTGYLQLLLMRSKKEGDEFSVKSLIRAEAQTKKMVSMIHDFLSLARMEEGKLQIERREVE
LHPLMIEIAEDAKFLTSQHTIKLIDCEGIIINADRDKIGQVLMNLVSNAIKYSPEGGLIT
LGCEKQNGKVKIYVSDQGIGISPGDQKRLFERFYRVNNNGIKTVPGFGIGLYLVSEILRY
HDSEIVVESEEKAGSVFYFYLQTLS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcgaagtacttcaggcaaaaattgctcaatatgagaaagaaaacaaagaa
ttgaaatttcgcttagaggaattgaatgactttgtggagaacgcctcattgccactacat
tgggttaatgctgaaggaataattacctgggctaatcaagctgaatttgtttcattaggt
tatacaagagaagaatatattggatttcctatcagtaattttcatgaagatcaggaagtt
atacaggacattctttaccggctgaccaataaccagaccctgctaaattatccagccagg
ctgcgctgtaaaaatggtgacatcaaacatgtgctcattaattcaagtgtactctggaaa
gaagataaatttgttcatacccgttgttttaccagggatattacgcccctgatccaggaa
caggaaagaaaggcagagctgatcaatgaactggagcagaacgaaaccaagttaaaaata
gccatagaatctactaaccttggtacatgggaatgggatccaataacaaatattttatac
tggtcagaagaatgcagaaatttctttggctatcctgctgctgaacaaataacttttgat
gcattcagtgagatgattcatcctggagatcgatccactgtgcttctggcgatgcatgaa
tctattgaacccggtaatggcaaaacacataacctgacttacaggatttaccgtctggat
aacaacgaaatgcgctggattaaagtgcagtggagaagtagctttaaaacagatcgttac
gctagcttattaatcggaactacactggatatcacagacgttaaatatgcagaagagaaa
agtgaaaaattagctgctattgtcaattcaagcaatgacgctgtaatcagtaaaacttta
aatggaatcattaccagctggaacgactccgcagagcggacttttggctatagtgctgca
gaagtaataggtgagccgatacttaaattaataccgcctgaccgtcaggaagaagaagtt
cagattctttcccgattaaataaaggcgaaagggtagatcattttgaaaccaaaaggatc
actaaatccggaaaaacgatcgatgtgtccctgactatatcacctgttaaagatatggac
ggtaaaattattgggttatcaaagattgccagagatatcacagagcggaaacaagaagag
cagcggaaaaatgactttgtggctatggtgagccacgaattgaaaacccctttaactgcg
cttactggttatctccagttattactgatgcgttccaaaaaagaaggggacgagttcagt
gttaaatcattaatcagagcagaagcccagactaaaaaaatggtatcgatgattcatgac
tttttgagtttggcaagaatggaagaaggaaaacttcagatagaaagaagggaagtagaa
ttacatcctttaatgattgaaattgcagaagatgctaaattcttaacttcacaacatacg
ataaaactaatagactgtgagggaattataatcaatgccgatagagataaaatcggacaa
gtgttaatgaacctggtcagcaatgccattaaatattcgcccgaaggaggcttgattaca
ctgggttgcgaaaaacagaacgggaaagtgaaaatttatgtcagtgatcaggggataggt
ataagccccggtgatcagaaaagattatttgaacgtttttacagagtcaataataacggc
ataaaaactgtacccggatttggtataggcttatatcttgtttcagagatcctgcgttac
catgatagtgaaattgtagttgaaagtgaagaaaaagcaggttccgtattttacttttat
ttacagacccttagctaa
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