Pedobacter cryoconitis: AY601_2729
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Entry
AY601_2729 CDS
T04341
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcm03000
]
AY601_2729
Transcription factors [BR:
pcm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AY601_2729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_17
TetR_C_6
TetR_C_29
TetR_C_4
Motif
Other DBs
NCBI-ProteinID:
AMP99613
UniProt:
A0A127VE25
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All DBs
Position
complement(3225593..3226195)
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AA seq
200 aa
AA seq
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MNKSYTKAERTRNFIIESTAVIFNKKGYAGTSLSDLTKATGLTKGSIYGNFENKEEVAVA
VFDYNYSRVANLTSQEVNRATTCYDKLMAYVRVYQKIIKETMNRGGCPVLNTATEADDTN
ELLRKRAADVVLNWEGNLTAIIKKGILKKEFKTNIDPRKTALSIIALIEGGIMISNITGD
VTSMDLILNTVETLIDQIER
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtcatacaccaaagctgaacgtacccggaactttatcattgaaagtaccgcg
gtgatttttaataaaaaagggtatgcaggaacatccttatccgatctgaccaaagctacc
ggtctgactaaaggaagtatctacggtaattttgaaaacaaagaagaagttgcagtggcg
gtttttgattataactattcaagagttgctaatttaacaagccaggaagttaacagggca
actacctgttatgataaactaatggcctatgtgcgggtttatcagaaaattataaaagaa
accatgaacaggggaggctgcccggtactcaataccgcaacagaagctgatgataccaat
gagttactaaggaaacgagctgcggacgtggtcttaaactgggaaggtaatttaacagca
atcatcaaaaaaggtatactaaaaaaggaatttaaaaccaatattgatccccgtaaaaca
gccttgtccatcatcgcactcatagaaggagggattatgatttctaatattaccggcgat
gtgacttcaatggatctgatactgaacaccgtagaaacacttattgaccagattgagcgc
taa
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