Phanerochaete carnosa: PHACADRAFT_119388
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Entry
PHACADRAFT_119388 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_119388
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHACADRAFT_119388
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
Helicases
PHACADRAFT_119388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
18907855
NCBI-ProteinID:
XP_007394954
JGI:
Phaca1_119388
UniProt:
K5V3H7
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MAQAGPSSLKKQKKKQPNNGFRSSKVRKVQAVKSIETLEEAALQYEPPINLKVFADLPIS
DLTKRGLKKASFVDMTDIQVKSLPASLRGKDVLGAARTGSGKTLAFLTPVLEVLYRRKWG
PQDGLGALIISPTRELAVQIFEVLRSIGGYHTFSAGLIIGGKNLKDERDRLTRMNILVAT
PGRLLQHMDQTVGFECDNLQMLVLDEADRILDMGFHKTLTALLSHLPKSRQTLLFSATQT
KSVTDLARLSLKDPVYISTQEEEASGVMPKSLEQHHVVVDLDKKLDVLWSFIKTHLQTKT
LVFMSCCKQVRFVFETFCKMHPGIPLLQLHGKQKQMSRLATFQRFTSIRHAVLLATDIAA
RGLDFPAVDWVLQVDAPEDAETYIHRVGRTARYESAGKALLFLAPSEEEGMKAALAKKGI
EAAKIKIKASKTHSVQNQFQKLCFEDPDIKYLGQRAFVSYLRSVHIMKDKSIFKLEELPV
QRYAEALGLPGAPKIKFLNKEIAKAKKNASHAAAKAGTMSQLDRSNESDDESESDGGSSK
SSSEAEITEAEASTKPEKVRTKYDRMFERKNQNILSEHFNKLVNHSADASDSDGDFITLK
RADHELNEEELPEHEFTSKRKQRLALSKKALAQRGSKGSKLVFDEDGRAHEVYEMKSAEE
VFHGEDDVREAGKRFAEEERGKLREADVIDRVAAKEKKKEKKRKRKEREQEEMSGSDDDS
AAFAPVIEPVEGEGYVSPNFDLPPSSDEEDAPPPSKRAKKSKFPLAEEEELALQLLRSRR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcagggccttcgtcgctcaaaaagcagaagaaaaagcaacctaacaatgga
tttcggtcgtcaaaagtgaggaaagttcaggcagtgaaatccatcgagaccctcgaggag
gctgcactgcaatatgagcctccaataaatttaaaggtctttgcggacctccccatttca
gatctgacgaagcgtgggctgaagaaggcttccttcgtcgacatgactgatatccaggtc
aagagtctgcccgcctcacttaggggcaaggacgtccttggagcagcgcgaacgggaagc
ggaaagacgcttgcgttcctgacaccggtgctggaagtcttgtacaggcggaagtggggt
cctcaggacggtctgggagctttgattatttcacctacccgtgaactggcggtgcaaata
tttgaagtactacgttcaataggaggctatcacacattctctgccggattgatcatcggc
ggaaagaacctcaaggatgaacgcgaccgcttgacaagaatgaatatactcgtcgccact
cctggacgtctattgcaacatatggatcagactgttggtttcgagtgtgacaatttgcaa
atgctagtgctcgatgaagctgatcgcatattggacatgggatttcacaaaactctgacc
gcattgctctcccaccttccaaaatcacgccaaactcttctcttctctgccacgcaaacc
aagtctgtcaccgacctcgcacggctatcattgaaggacccggtgtacatctctacgcag
gaagaagaagcgagcggcgtaatgccaaaatcgcttgagcaacaccacgttgtggtggac
ctcgacaagaaacttgacgtgctgtggagctttatcaagacgcatttgcaaaccaagacg
ctggttttcatgtcctgctgcaagcaggtccgctttgtctttgagacgttctgcaagatg
caccctggtattcccctgttgcaacttcatggcaagcagaagcagatgtcccgtcttgcg
acgttccagcggttcacttcgataaggcacgccgttctgctcgcgactgacattgctgca
cgtggtctggacttccctgctgttgactgggtcctgcaagtcgatgcgcctgaggatgcc
gagacgtatatccaccgtgtcggtcggacagcgcgatacgagagtgcaggcaaagcgctg
ctatttctggcgccaagcgaggaggagggcatgaaggccgcgctcgccaagaagggcatc
gaagctgcgaagatcaagatcaaggcgagcaagacgcacagcgttcagaaccagttccaa
aagttgtgcttcgaggacccggacatcaagtatctcggacaacgagcattcgtttcttac
cttcgctctgttcacatcatgaaggacaagtctatctttaagctcgaagagctacctgtc
cagcgttacgcagaagctcttggtctacctggtgcacccaaaatcaaatttcttaacaag
gaaattgcaaaggcgaagaagaatgcatctcatgcagctgccaaagcggggaccatgtcg
cagctcgacaggtcgaacgaatcggatgatgaatctgaaagcgatggcgggtcaagcaag
agctctagtgaggccgagatcaccgaggctgaggcttccacgaaacctgaaaaggttcga
acgaagtacgaccgcatgttcgagcgcaagaaccaaaatatcctctcggagcactttaac
aagctcgtcaaccactctgccgacgctagcgactccgacggcgacttcatcacgctcaaa
cgtgcggaccacgagctcaatgaggaagagctccccgagcacgaattcacgtcgaagcgc
aagcagcgacttgcactctcgaagaaggcgctcgcgcagcggggatcgaaggggagcaag
ctcgttttcgacgaggatggtcgtgcgcacgaggtatacgagatgaagagtgccgaagag
gtattccatggcgaagacgatgtgagggaggctggcaagcggtttgcggaggaggagcgc
gggaagctgagggaggccgatgtcatcgatcgggtggcggcgaaggagaagaagaaggag
aagaagcgtaaacgcaaggagcgcgaacaagaggagatgagtggttctgacgatgacagc
gcggcctttgccccggtgatcgaacctgtggaaggagaaggctacgtcagtcctaacttc
gacctacccccttcttcagacgaagaggatgccccaccaccatcgaagcgtgcaaagaag
tcgaagtttcccctcgcagaagaggaagaacttgcgttgcaactcttgcgcagcaggaga
tag
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integrated database retrieval system
