Phanerochaete carnosa: PHACADRAFT_173398
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Entry
PHACADRAFT_173398 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_173398
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
PHACADRAFT_173398
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
PHACADRAFT_173398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
18909630
NCBI-ProteinID:
XP_007395627
JGI:
Phaca1_173398
UniProt:
K5WXV9
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MEIELKYIPFEASQWDIKRAVGGVLHSDDFFNASDPTARLINFEVNLNKHKSSEARNDGT
GVLILPDRKVGQKLLRLLRAGVHKVRVNGRKVHMNISPRKPEARVKERLEKTLYLNPEIE
EELEAKLEKLDVGLHVDKLQFGVYYRRPGDSVKTSRLFSNEYEISHVNKSAGLLHFEYTH
KLIRIRLGDPMTEQLAHNVVITFANIRKLAIGLDFGNPFVCFELLVPPVFQLENFNRTLT
GVEWRDERKFRQRLDSLNEVHAAIAPYAHQVRIILHEQSDLDRFSELCEIAELCRPFRTQ
MEAFSNHFFDPSRIIKVERMFREFDWPIAFQLEALLRNGFLNTEDLLERFYGPVKQLCVR
RPKAAAETLRAFTEAMRGRDPRESPEDIFEKVWSREEPEAVELSSGNFMCHHVTITPTRM
LLEGPYVIQSNRVIRQYRGYEDHFIRIDFRDEDRLQYRWDRDTDGKSLLENRVGGLLKGG
FSLATRKFEFLAYSSSALREHAVWFVNPFYHQEKGWIDAEYIRSSLGDFSAVINCPSKYA
ARIAQAFTATDPSVEITRDQWEQMDDLGEEPYLFTDGVGTISSELGDMIWEALCSARDDS
YRKNIKPSAYQIRFLGYKGMVAVDGRLKGVKMRLRPSMNKFEGPAEETATIEIARAFERP
NTCYLNRPLIMVLEDRGVIKQAFLELQEAAVAAIHMSSDSVMQCRQLFREHSLGGSYRLS
YVWQLLNAVGLGMEHEENIRVVLQDPFFERLVQFAKNDVLRSIKHNARIPVLGSYLLVGV
ADEGPAYEAEGCENVFKLEEGQIYACVQKSVDEELIWIEGSVTISRSPVVHPGDVQRVTA
IGKPPDDGRPCFFRNLKNVVVLPSTGGRSLASMLGGGDLDGDLYSIIWESTLLPTEHQGP
AKYEPVGKRELDRPSRIEDICDFIIEYIDSDVLGLLSDRHLIIAGELREGTRDAKCIRLA
ELCSQAVDYPKNGVPVDIQNSPRWLIPYKPDWKKAEDNAPRKTDYYESDRALGDLFRNVQ
LLEPPKTVHLPSKRLPPLSDSISQALRPYIEDIFGPGGARNSERDVASIAPVFGRYAEEL
RYICVTHSLSDSPESRLVEEEVVVGTITAVCSQHRYRNDRTYRMRLHSKVLVDSVRRRLY
QPVRDQLAPEAVGQMRYNLQQGWLAWDYGMRNRHIPGANSFAIIALGVIGAALTDMGRIL
LKPGLEDMAGDVDGM
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgagctcaagtacatacccttcgaagcgtcgcagtgggacatcaagcgtgcc
gtcggcggcgtgctgcacagcgacgacttcttcaacgcatcggacccaacagccagactt
atcaacttcgaggttaatcttaacaagcacaaatcctccgaagcccgcaacgatggcact
ggagtgctcatccttcctgatcgcaaagtgggtcagaagctgctcaggctccttcgtgcc
ggtgtccacaaggttcgcgtaaatgggaggaaggtacatatgaatatctccccaaggaaa
ccggaggctagggttaaggaacgtctggagaagacactctacctgaatccggagatagag
gaggagctagaagcaaagcttgagaagctggacgtaggccttcacgtagacaagttacag
tttggcgtttactatcgcaggcctggcgactccgtcaagacgtccagattgttttccaac
gagtatgaaatctctcatgtgaacaagagtgccggtcttctacactttgaatacactcac
aaactcatccgcatccggcttggagacccaatgaccgagcagctcgcccacaatgttgtt
atcaccttcgccaacatacgcaagttagcaatcggtctcgacttcggcaatccattcgtc
tgcttcgagctactcgttcctcccgtattccaactggagaacttcaacagaaccttgacc
ggagtagagtggcgcgacgagcgcaaattccggcaacgtctcgacagccttaatgaagtc
catgctgccattgcaccctatgcacaccaagtgcggatcattctgcacgagcagagcgat
ctggacaggttctccgagctatgcgagatcgcagaattgtgtcgaccctttcgtactcaa
atggaagccttctcgaatcatttcttcgatccatcgcggataatcaaggtagagcgcatg
tttagggagttcgactggcctatcgctttccagctggaagcacttcttcgcaacggcttc
ttgaataccgaagacctcctggaacgtttctatggtcctgtgaagcagctatgcgttcgc
cgaccgaaggccgctgccgagacgctcagggcattcacagaggctatgcgcggcagagac
ccgcgggagtcacctgaggacatattcgaaaaagtctggtcgcgcgaggagccggaggct
gtcgagttgtcttccggtaatttcatgtgccaccacgtcaccatcaccccgactcgaatg
ttgctggagggaccatatgtcatccagtccaatcgcgttatccgacaatacagaggctac
gaagaccacttcattcgtatcgacttccgtgacgaagaccgcctacaatatcgctgggac
cgagatacggatggtaaatcgctcttggaaaaccgagttggcggtcttttgaaaggcggg
ttcagcttggcgacacgcaaatttgagttcttggcctattcatcgtccgctctgcgcgag
catgcggtgtggtttgtgaacccattctatcaccaggagaagggctggattgacgccgag
tacatccgctcgagccttggagacttctcggccgtcatcaactgcccgtcgaaatatgca
gcacgtatcgctcaggcattcacggctaccgatccctccgtcgagattactcgggatcaa
tgggagcagatggacgatctcggcgaagagccgtacctcttcactgacggcgtgggcacc
atatcctcggagctcggcgacatgatttgggaagctctgtgttctgcccgagatgacagc
tatcggaagaacattaagccttccgcataccaaattcggttcctaggctataagggtatg
gtggcggtagacggacgcctcaagggtgtcaagatgcgattacggccatctatgaacaag
ttcgaaggtccagcagaagagaccgctactattgagatcgctcgagcgttcgaacgcccg
aacacgtgctatcttaatcgaccccttatcatggtgctagaggatcgtggtgtcattaag
caggccttcctagagctgcaggaagctgccgtggccgctatccatatgtcaagcgacagc
gtgatgcaatgcagacagctgtttcgcgagcattctttgggcggatcctaccgactttcg
tatgtttggcagctccttaatgctgtcgggcttggcatggaacacgaggagaacattcgc
gtagtccttcaggatccattctttgagcgcctcgtacaatttgcgaagaacgacgtcttg
cgttccatcaaacataacgcgcgtattccggtgcttggcagctatttgcttgtaggtgtt
gcagacgaaggcccagcgtacgaagccgaagggtgtgagaacgtgttcaagctggaggag
gggcaaatctatgcctgtgtgcagaagtcggtagacgaggagctaatttggatcgaaggc
tctgtcactatctctcgcagcccagtcgtgcatcctggagatgtacaacgagtgactgct
atcggcaagcctccagatgacggtcgaccgtgtttcttcaggaacttgaagaatgtcgtt
gtcctgccatctacaggcgggcgctcattggcgtcaatgcttggtggaggcgacctggat
ggagacttgtattcgatcatctgggagagcactctacttcccacagagcaccagggcccg
gcgaagtatgagccggtgggtaagagagagcttgataggccgagtcgcatcgaagatata
tgcgatttcatcatcgagtacattgactcggatgttctgggattgctctccgataggcat
ctcataattgctggtgagcttcgtgaaggtaccagagacgcgaagtgcattaggctggca
gagctgtgcagtcaagccgtggactatcccaagaacggtgttcccgttgacatccaaaac
tcgccacgctggctcatcccttacaagcccgattggaaaaaggcagaggacaatgccccc
cgaaagactgactactatgaatctgaccgtgctctcggcgacctattccgcaacgtccag
ctgctcgagccacccaagacagtacacctaccctccaagcgtctgcctcccctctcagac
agcatttcgcaggctctgcggccgtacatcgaggacatctttggccctgggggcgcacga
aattcggagcgggacgtcgcctcgatcgcaccggtcttcggccgctatgccgaagagctc
cggtacatctgcgtcacgcactcgctctcggactcgcccgagagccggctcgtggaggag
gaggtcgtcgttgggacgatcacggccgtgtgttcgcagcaccggtaccggaacgaccgg
acgtaccgcatgcggctgcactccaaggtgctcgtcgatagcgtgcggcgcaggctctac
cagcccgtgcgtgaccagctcgcgcctgaggcggttgggcagatgcgctacaatctgcag
cagggatggctcgcgtgggactacggcatgcgcaacagacacatacccggcgcgaacagc
tttgcgattattgcgctcggcgttatcggcgctgcgctgacggatatgggccggatcctg
ctgaagcctggactggaagacatggcgggagatgtcgatggaatgtga
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integrated database retrieval system