KEGG   Phanerochaete carnosa: PHACADRAFT_210427
Entry
PHACADRAFT_210427 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
pco  Phanerochaete carnosa
Pathway
pco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHACADRAFT_210427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pco03021]
    PHACADRAFT_210427
   03041 Spliceosome [BR:pco03041]
    PHACADRAFT_210427
   03036 Chromosome and associated proteins [BR:pco03036]
    PHACADRAFT_210427
Transcription machinery [BR:pco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     PHACADRAFT_210427
Spliceosome [BR:pco03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PHACADRAFT_210427
 Complex B
    PHACADRAFT_210427
 Complex C
   U2 SnRNP specific factors
    PHACADRAFT_210427
Chromosome and associated proteins [BR:pco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     PHACADRAFT_210427
    TFTC complex
     PHACADRAFT_210427
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 18912966
NCBI-ProteinID: XP_007397316
JGI: Phaca1_210427
UniProt: K5VSY3
LinkDB
Position
Unknown
AA seq 1213 aa
MHLYNLTLQPSTTISQAIVGNFSGARQQEIIVSRGTRLELLRPDVQTGKVSTVVTSDVFG
SIRSLTAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKVHQETYGKSGARRIVPGQY
LATDPKGRSVMIAATEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFENP
TFAALEVDYSESDQDPTGEAFNNAEKLLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG
GQLASSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDKERGLIITAAVMHK
MKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASSLCILKSGFLFVAAEFG
NHHLYQFQKLGDDDNEPEFSSTMYPNFGMANPAISLPPAYFSPRGLDNLTLVDELESLDP
VVDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSDLPGIPNAVWTTKLR
EDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSSPTLAVQQLGADALLQVHPHGIR
HVLVDRRVNEWRVPQGKTIVCATTNRRQVVVALSSAELVYFELDLEGQLNEYQERKAMGS
TVLALSVGEVPEGRQRTPFLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM
LDAGINKVQPTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQIQRNPG
ILALSSRSWLNYTHQNLMHFTPLIFDNLDYAWSFSAELCPEGLIGISGSVLRIFQIPKLG
TKLKQDSIPLSYTPRKMIVHPTNGFFYMIEGDHRVMGEEAKQKKIEELRQQGKQVDEEML
NLPPEVFGRPKAPAGTWASGIRIVSPVDAQTVNFIPLDNNEAAFSIAVVPFTARGGELTL
VVGTAQDTFLAPRSCTSGFLRTYRFLDDGRDIELLHKTETNDVPLAIMAFQGRLAAGIGK
ALRIYDIGKKKLLRKVESKNFSNAIVTLNTQGSRIIVGDMQESIFYAVYKPPENRLLIFA
DDAQPRWITAVTMIDYNTVAAGDRFGNVFVNRLDPKISDQVDDDPTGAGILHEKGILMGA
PHKTAMIAHFHVGDIVTSIHKVSLVAGGRELLLYTGLHGTVGILVPFVSKEDVDFISTLE
QHMRTEQLSLVGRDHLAWRGYYVPVKAVVDGDLCEMFARLPASKQSSIATELDRTVGEVL
KKLEQLRVTASGF
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgcatctctacaacctcacgctccagccctcgacgaccattagtcaggctatcgttgga
aacttctcgggggcaaggcaacaagaaattattgtctcgcggggcacgcgactcgaactc
cttcgtccggacgtgcagactggtaaagtctcaacagtcgtcacaagtgatgtctttggg
tccattcgctcgttgacggcttttcgattgactggaggcacgaaggactacgcgatcgta
ggctcggactccggccgtatcgtcattctcgattatgaccccaaaacaagcagctttgtc
aaagtccaccaagagacctacggcaagtccggcgcacggcgtatcgttcctggacaatac
ctcgctactgacccaaagggtcgcagcgtcatgattgccgcgacggagaaagcgaagctc
gtgtacattctcaaccgcgatgctgccgccaacctcaccatttcctcaccgctcgaggct
cataagaataatgccatcattcatcacattgtgggcctggacgttggctttgaaaaccca
acattcgccgcactggaggtggattactctgagtcggaccaagacccgactggagaggcg
ttcaacaacgcagaaaagctcttaacttactacgaattggatcttggactcaatcacgtt
gtgcgcaaatggagcgaacccactgacccacgtgcaaacctcctcgtgcaggtgccggga
gggcagctagcctcttccgaccgctacgatggcccctctggtgtgttagtatgctgtgaa
gatcatatcatctatcgacacatggatgcccctcagcaccgagtgcccattccccgccgg
cggcatccattagaggataaggagcgtggtctcatcataactgcggcagtcatgcacaag
atgaagggcgcgttcttcttcttgctgcaaagtgaggagggcgacctctacaaggtaaca
atcgagcacgaagagcaggatgtcaaagccttgaagatcaaatacttcgacactgtgcct
gttgcttcaagtctctgcatcttgaaatccggtttcctatttgttgcggcagagtttggc
aaccatcatctctaccagttccagaaactcggagatgacgacaacgagcccgaattctcc
tctactatgtacccgaactttggcatggcaaaccccgctatctctcttcctcctgcatac
tttagccctcgtggtctcgacaacctgacgctggttgatgaacttgagagcctggatccc
gtcgttgacgcgaaggttctcaacctcctacccaattctgattcaccgcaaattttcgca
gcttgcggacgcggtggtagaagctctctgcgaatgctgagacatggtctcgaggtcgaa
gaagtcgtcagctcagatctccctggtattccgaacgccgtttggacaacgaagcttcgg
gaagatgatccattcgactcgtacattattctgtccttcgtcaatggcactctcgtcctt
tcaatcggtgagacaatcgaagaagtgcaagatacaggcttcctctcctcgtcccccaca
cttgccgttcagcaactcggcgcagatgctctcctgcaagtgcaccctcatggtatccga
catgtactggtggatcgccgtgttaacgagtggcgtgtgccgcaaggcaagacgatcgtt
tgcgccaccaccaatcgtcggcaagtcgttgtcgctctgagcagtgccgagcttgtctac
ttcgaactcgacttggagggtcagttgaacgagtaccaggagcggaaagccatgggcagc
accgtccttgcgctgagtgtcggtgaggtgcctgaaggcaggcagcgcacgccattcctc
gctgtcggatgcgaggaccaaacggtgcgcatcgtgtccctcgaccccgagagcacgctc
gagacgatcagtctgcaagcgttgacggcgcccccgtctgcaatctgcattgccgacatg
ttggatgctggtatcaacaaggttcagccgacaacttttgtaaacatcggcttacaaaac
ggcgtgctgctgaggacggtgctcgaccctatcaatggccagctgactgacacgcgaacg
aggttcttgggaacgcgccccattaaacttgttcgcgtgcagatacagaggaaccctggc
attctcgctctctcgtcccggtcatggttaaactacacccaccagaaccttatgcatttc
acacctctgatcttcgacaatctcgattacgcttggagcttctccgcggaactctgcccg
gagggtctcattggtatctcagggagcgttctgagaattttccaaattcctaagctgggt
acgaagctcaagcaggactccattcctctctcatacacaccgcgcaagatgattgtgcac
cctacgaacgggttcttctacatgatcgaaggcgaccatcgggttatgggagaggaggcg
aaacagaagaagatcgaggagctgaggcagcaagggaagcaagttgacgaagagatgctg
aaccttcctccagaagtgtttggtcggccaaaagcacctgcgggcacatgggcgtcgggt
atccgtatcgtcagtcccgttgatgcacaaacggtcaatttcataccgctcgacaacaac
gaggccgcgttctcgatagctgtcgtgccattcacggcccgcggaggcgaattgaccttg
gttgtcggtactgctcaagacacattcctcgcaccacgttcatgcacgagtggcttcctg
cgtacctaccggttcttggatgatggtcgggacattgagttgctgcacaaaacggagacg
aatgacgttccactcgctatcatggccttccaaggtcgcctggctgctggtattggcaaa
gctttgagaatctacgatatcggaaagaaaaagctcctgcgcaaggtcgagagcaagaac
ttttctaacgcaatcgtaacgctgaatacgcaaggttcgcgcatcattgttggtgacatg
caagagtcgattttctatgccgtctacaagccaccagaaaaccgcttgctcattttcgcc
gacgatgcccagccgcgctggattaccgctgtcacgatgatcgactacaacactgtcgcc
gccggtgaccgcttcggcaatgtcttcgtgaaccgactcgaccccaagatcagtgaccag
gtcgacgacgacccaacaggcgcgggcatcctgcacgagaagggcatcctcatgggcgcg
ccgcacaagacggcgatgatcgcgcactttcacgtcggcgacatcgtgacgtcgattcac
aaggtctcgctcgtcgcgggcggacgcgagctgttgctctacaccgggctgcacggcacg
gtcggcatcctcgtgccgttcgtctcgaaggaggacgtcgacttcatctcgacgctcgag
cagcacatgcgcacggagcagctcagcctcgtcgggcgcgaccacctcgcatggcgcggg
tactacgtgcctgtcaaggctgtcgtcgacggcgacctctgtgagatgttcgcgcgtctg
ccggcgtcgaagcagagctcgatcgcgaccgagctagaccgcaccgtcggtgaggtgctc
aagaagctcgagcaactccgggtcactgcgagcgggttctag

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