Pectobacterium colocasium: PJ912_00715
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Entry
PJ912_00715 CDS
T08961
Name
(GenBank) AvrE-family type 3 secretion system effector
Organism
pcoa
Pectobacterium colocasium
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Gene cluster
GFIT
Motif
Pfam:
AvrE_T3Es
Motif
Other DBs
NCBI-ProteinID:
WED68889
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Position
complement(129155..130684)
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AA seq
509 aa
AA seq
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MPLSGRMNHELLTGIYRQPDSASGAGEQLRLHDGKLFALNTEFGVWQQSSDVAHSQLSRQ
GDGQLYAIKDDHTLSNLSAGTESATFSDKITAFSANQNGQSAVLTEQDHLTQLHLMSALD
AAPQPVELKLDSGEPVYAKAVGLTAEHLLVADNDGKLYHAPLPEAGEPNVTLTPASTPEL
NTVLGDDHRITGFAHDEHGQTQALATDRQGQKHVASLGQNGLSPTPGWNLSDSLVVDNKL
GLTTTAPAAKDTLDLGRLGQIGLQDGKVHFYNGNTQNWEASSVEASQLKRGLDNQAYTLK
DGEITPLSINQKSGSFTHGDNTVFALPQVRMTPSAGTALPGIAKDDGVSTMAVINRNKFI
AVDKQGDSHFHQIKPGTDKLAAPPLALPKNGLSGEIQDITLDHQQTLFALNKDGQLFQLP
KADWQNAANHDTAQWQPVKTPIEGKVNSLGTDAQHHLQVAHDDHELHTQQGNAWKTTVPK
GEAPLPSEARAAETVFGRLDVATKGRRYR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctatctggccgcatgaaccatgagctgttgaccggtatttaccggcagcctgat
tcagcttcaggcgcgggcgagcaattgcgcctgcatgacggcaaactttttgcgttaaac
accgagtttggcgtctggcagcaaagcagcgatgtcgcccacagccagttatcccggcag
ggggatgggcaactgtatgcgattaaagatgatcacacgctgagtaatctctcggcggga
acggaatcagccacgttcagcgataagattacggcgttctccgccaatcagaatgggcaa
tcggccgtgctgaccgagcaggatcaccttacgcagctgcatctgatgagcgcgttggat
gccgcgccgcagccggtggaactcaaactggacagcggcgaaccggtgtatgcgaaagcg
gtggggttaaccgcagaacacctgctggttgctgataatgacggcaagctttaccacgca
ccgctgcctgaagcgggtgaaccgaacgtgacattaaccccagccagcacgccagaactg
aatacggtgctgggtgatgatcaccgtattaccggatttgcccatgatgaacacggccag
acgcaggcgctcgccaccgaccgtcaaggacaaaaacacgtcgcttctctgggacaaaat
gggctgtcgccaacgccgggctggaacctgagcgacagtctggtcgtcgataacaagctg
ggtctgaccacgacagcccccgcggcgaaagacaccttagatctgggacgactagggcaa
attgggttacaggacggcaaggtccatttttacaacggcaatacccaaaactgggaagca
tccagcgtcgaagccagccaactgaagcgtgggctagacaatcaggcttacacgctgaaa
gacggtgaaatcacgccgctgtccatcaaccagaaatccggctcgtttacgcacggtgac
aacaccgtgtttgcgctgccacaggtgcgaatgacgccgtctgcgggcacggcgcttcct
ggtattgcgaaggacgacggcgtctcgacgatggcggtcatcaaccgcaataaatttatt
gccgtcgataagcagggcgattcgcatttccaccagatcaaaccgggaacggataaactc
gctgcgccaccgctggcgttgcctaaaaatgggttgtccggtgagattcaagacatcacg
ctggatcaccagcagacgctcttcgccttgaacaaagacgggcaacttttccaactgccg
aaggccgactggcaaaatgcggctaatcatgacactgcccaatggcagcctgtgaagacg
ccgattgaggggaaagtcaattcgctgggcacggatgcgcagcatcatttgcaggtggca
catgacgatcatgagcttcatacccagcaaggcaacgcgtggaaaacgacggtgccgaaa
ggggaagcgccattaccctcggaagcgcgtgccgcagaaacggtgtttggtcggcttgat
gtcgcgacaaagggacgaagataccgttga
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