Pectobacterium colocasium: PJ912_21400
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Entry
PJ912_21400 CDS
T08961
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00521
Streptomycin biosynthesis
pcoa00523
Polyketide sugar unit biosynthesis
pcoa00541
O-Antigen nucleotide sugar biosynthesis
pcoa01100
Metabolic pathways
pcoa01110
Biosynthesis of secondary metabolites
pcoa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PJ912_21400 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PJ912_21400 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PJ912_21400 (rfbD)
Enzymes [BR:
pcoa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
PJ912_21400 (rfbD)
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GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WED68348
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Position
complement(4135926..4136768)
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AA seq
280 aa
AA seq
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MKILLTGANGQLGRCFQDCLPTEWEILATDTAELDITDLERIEELVKNFQPDAIVNAAAY
TAVDKAESEPVLAENINVTGPENLAIVANKQGIRLVHVSTDYVFDGNATEPYHEDSATNP
LSVYGKTKLAGEQAVTQAAPEAIIVRTAWVFSEYGNNFVKTMLRLAKERDTLSIVSDQRG
CPTYAGDLAQAIISLLEKSAAGGIYHYCGDREVSWYEFAKFIFKMAKQQNVINKIPQLIP
ITTEEYPTPAHRPQYSALECGKILSLKIKLSNWETVLIKI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattattgacgggtgccaatgggcaattgggtcgctgttttcaagattgtttg
ccaactgagtgggaaatcctagcaaccgatactgctgagctcgatattacggatttagaa
cgtattgaagagttagtaaaaaattttcaaccagatgctatcgttaatgccgcagcctac
acagcagtagataaagctgagtcagaacctgtgcttgcagaaaacattaacgttacgggt
cctgagaatttagcgattgtcgcaaataagcaaggcattcggttggtccatgtttctact
gactatgtctttgatggtaatgctactgaaccttaccacgaagacagtgcaacgaatccg
ctaagcgtgtacggtaaaacaaagttagctggcgagcaggcagtgacacaagctgcgcct
gaagcaattattgtgcgtactgcttgggtatttagcgaatacggcaataacttcgtgaaa
accatgctccggctagccaaagaacgggatacgttgagtattgtcagcgaccagcgtggt
tgcccaacttatgcaggagatttagcgcaagcgattatttctcttcttgagaaaagcgcg
gcaggtgggatttatcattattgtggggatagagaagttagctggtatgaatttgcaaaa
ttcatttttaaaatggcgaaacagcaaaacgttatcaataaaataccacaattgattccg
ataacaactgaagagtaccctaccccagcacatcgacctcaatattctgcattagagtgc
ggaaaaattctcagtctaaaaataaaattatcaaattgggaaacagtgttgattaaaata
taa
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