Phasianus colchicus (Ring-necked pheasant): 116242276
Help
Entry
116242276 CDS
T07365
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116242276 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
116242276 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116242276 (THOC1)
03041 Spliceosome [BR:
pcoc03041
]
116242276 (THOC1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116242276 (THOC1)
Spliceosome [BR:
pcoc03041
]
Complex C
Other components
EJC/TREX
116242276 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116242276 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
116242276
NCBI-ProteinID:
XP_031468825
Ensembl:
ENSPCLG00000021624
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MASSARVAERRSAGAMSPPLLFSLPEARHRFTISTREALHHKTLKPLLNAFNQIPGSENE
KKCTLDQAFRVIVEEEIINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPL
DQCDKIFTFVEKNVATWKSNMFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARL
FPLSEKSGLNLQSQFNLENVTVFNTNEHESTLGQKHSEERDEGMDVEEGEMGDDEAPTSC
SIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKL
EELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLT
DEQSLWIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSQP
EFQLGPPDSKPMRPARKRPAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSESRE
YMPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSL
PEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKPMTGEQMEAF
AIRLGEHWRVLAPYLEMKDSDIRQIEVDSDDVKMRAKQLLVAWQDQEGAHATPENLITAL
SKAGLGDLAESLTNDTDSGS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagcgcgcgtcgcggagcgccgctcggccggagcgatgtcgccgccgctg
cttttcagcctgcccgaggcgcggcaccgcttcacgatctccaccagagaagctctgcac
cacaaaaccctcaaaccgctgttgaacgcctttaatcagattcccgggagcgaaaatgag
aagaagtgtaccctggatcaagctttcagagttatcgtagaagaggaaataataaacaaa
gctccgtgtgaaaacctgctggcaattatttctcttgctattaatggagtcactgaaggt
atctgcactgcatcgacaccttttgtgctcttgggagatgttctggattgcttgcctttg
gatcagtgtgataaaattttcacttttgtggagaagaatgttgctacgtggaaatcaaac
atgttttattctgcagggaaaaactacttgttacgaatgtgcaatgaccttctaaggaga
ttgtctaaatcacaaaacacagtcttttgtggaagaattcaactgttcttggcgaggttg
tttccgctatctgaaaagtcaggactgaacttgcagagtcagtttaacctggaaaatgtg
acagttttcaatactaatgaacatgagagcactcttggacagaagcactcagaggagaga
gatgaaggaatggacgtagaagagggtgagatgggagatgatgaagcaccaacaagttgt
tccattccaatagattataacctgtacagaaaattctggtcgcttcaggattactttaga
aaccctgtgcagtgctatgagaaggtctcatggaaaacttttcttaagtactcagaagaa
gttttggctgttttcaaaagttacaaattagacgacacgcaggcttcccgaaaaaagttg
gaagagctaaaaacaggtggagaacacgtgtactttgccaagttcctaaccagtgaaaag
ctgatggatttacagctgagtgacagtaacttccgccgtcacatcttgttgcagtatcta
atactatttcagtatctgaagggacaggtcaaatttaaaagttcaaactatgttctaaca
gatgagcagtctctttggattgaagatactacaaaagcagtttaccagcttctttcagaa
aatcctccagatggggaaagattctcaaaaatggtagagcatatattaaatactgaagag
aactggaactcatggaaaaatgaaggctgcccaagctttgtgaaagaaagatctcagcca
gagtttcagcttgggcctcctgattctaagccaatgaggcctgcaagaaagagaccagct
ccagaggacttcttaggaaaaggaccaagcaaaaaaatccttatggggaatgaggaactg
acccgactttggaatttatgtcctgataacatggaagcttgtaaatctgagagcagggaa
tatatgccaacattggaagaattctttgaagaagccattgaacaagcagatcctgaaaac
atggttgaaaataagtacaaggctgtgaacaactctaactatggatggagagcactaaga
ctactggcacgcagaagcccccatttcttccagccaacaaatcaacagttcaagagctta
ccagaatatctagaaaacatggtaatcaagttagccaaggagttgcctcctccttctgaa
gaaataaaaacaggcgaagatgaagatgaggaagataatgatgctttattaaaggagaac
aatgaaagtccagaggtacaacgggacaaacccatgacgggggaacaaatggaagcattt
gccatcaggctgggggagcactggagggttttggccccctacttggaaatgaaggattcc
gacattcgtcagatcgaggtggatagtgacgacgtgaagatgagagccaagcagctgctg
gttgcctggcaggaccaggagggtgcacacgccacaccagagaacctgatcaccgcgctg
agcaaagcagggctgggggaccttgctgagagcctgaccaatgacaccgacagcggcagc
tag
DBGET
integrated database retrieval system
