Phasianus colchicus (Ring-necked pheasant): 116243387
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Entry
116243387 CDS
T07365
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcoc01002
]
116243387 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116243387 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoc04147
]
116243387 (USP13)
Enzymes [BR:
pcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116243387 (USP13)
Peptidases and inhibitors [BR:
pcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116243387 (USP13)
Ubiquitin system [BR:
pcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116243387 (USP13)
Exosome [BR:
pcoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116243387 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
116243387
NCBI-ProteinID:
XP_031470434
Ensembl:
ENSPCLG00000022008
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MQRAALFGGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEANGD
LSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIASDALLSAKSPYRKQDPDSWEEE
LQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVAENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQQNGIS
PQMFKAFVSKDHTEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKSSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDINHLRATGLQPGEEELPDIAPPIIIPEDPKDRMVNHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGAASSGVTGFGAVGLD
NQPPEEMVSIIISMGFQRSLAIQALKATNNNLERALEWIFSHPELEEEDGEPALSVMDLE
NQTNANILAEARSGGPSIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLR
VCASERPPKDLGYIYFYHRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgggccgcgctgttcggcggcggcgacgcgcagatggcggccggggacctgggc
gagctgctggtcccctacatgcccaccatccgcgtgcccaagtccggggaccgggtctac
aagacggagtgtgccttctcctacgactctcccgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaacagga
cagtgtgtatatttgcatctgaaacgacatgtgatagagaaggtaccaggggcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctagaggcaaatggtgat
ctgagcagtgatgactttgaatatgaagatgaagcaaaacttgttatatttcctgatcac
tatgaaatctcattaccaaacatagaagagttaccagcactggtgacaatagcttctgat
gcactcctcagtgcaaaatcaccctataggaagcaggaccctgactcctgggaagaagag
ctacaggcatctaagcatgccaaatcgcttgtgcagttagacaatggtgttagaattccc
cccagtggttggaagtgctcaaaatgtgatcttcgggagaatctatggctaaacctgaca
gatggttcggtgctgtgtgggaagtggttctttgatggcagtggagggaatggccatgcc
atggagcactacaaggagacgggttatcccctggcagtgaagttgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccacatatagca
aagcatctggcacactttgggattgatatgctgcagatgcaagtggcagagaatggtcta
agggataatgatataaaaccaagagtttctgaatgggaagtgattcaggaagctggtgtg
aaactcaagcccatgtatggcccaggatataccggcatgaagaacctgggaaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccgcgaatattcgactactccccacttgatccaacacaagatttcaacacc
cagatggctaaactgggacatggcctcctttcaggccagtattctaaaccacccatgaaa
tctgagcttattgaacaggtgatgaaagaagaacacaagcctcaacaaaacggaatatct
cctcagatgtttaaggcttttgtaagtaaagaccacacagaattttcctctaatagacaa
caagatgcacaggagtttttcctacatctgataaatctagtagagaggaatcctgtaggt
tcagaaaaccccagtgatgttttccgtttcctggtggaagaacgcacacagtgctgccag
tccagaaaagtccgctacactgagagggtggactatatcatgcagttacctgttgccatg
gaggcagcaacaaacaaagatgaattaattgcgtatgagctgaaaaggcgagaagcagaa
gctgcaaggagagctccaccagaacttgtccgtgccaagatcccatttagtgcatgtttg
caggccttctctgaaccaagcaatgtagaggacttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagagttctcgttttgcctcatttcctcagtatttggtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttcgatagacatg
ccagatttcctagatatcaaccaccttcgagccacaggtctccagccaggagaagaggaa
cttcctgacattgcacctcccattatcattcctgaagacccaaaagatcgtatggtgaac
cattttgtggagtctctagatattgatgagtcttcggttatgcaactggcagagatgggt
tttcctttggaagcatgtcggaaagctgtgtactatacaggcaacctgggtgctgaagtg
gctttcaactggatcattgcacatatggaagagccagattttgctgaaccattggttgta
cctgtgtttggaggagctgcttccagtggtgtgactggctttggggctgttggattggat
aatcaacctcccgaggagatggtctccatcattatttccatgggcttccaaaggagccta
gcaattcaagctctgaaggcaacaaacaataacttggagcgtgcactggaatggatcttc
agccaccctgaattagaggaggaagatggggagcctgctttgagcgtgatggatttggag
aaccaaactaatgcgaatatccttgcagaggcaagatcagggggacccagtatcaaagat
gggcctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatgagt
ggtcactacgtttgtcatctcaaaaaagaaggaagatgggtgatctacaatgaccttaga
gtctgtgcctcagaacgacctcccaaagacctgggctatatttatttttaccacaggata
ccaagttag
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integrated database retrieval system
