Pseudomonas coronafaciens pv. oryzae: POR16_19545
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Entry
POR16_19545 CDS
T08147
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00521
Streptomycin biosynthesis
pcof00523
Polyketide sugar unit biosynthesis
pcof00541
O-Antigen nucleotide sugar biosynthesis
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
pcof01250
Biosynthesis of nucleotide sugars
Module
pcof_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
POR16_19545 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
POR16_19545 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
POR16_19545 (rfbC)
Enzymes [BR:
pcof01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
POR16_19545 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QGL58384
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All DBs
Position
4352380..4352925
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AA seq
181 aa
AA seq
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MNATRLAIPDVIVFEPKTFGDERGFFFESFNQKAFEEVVGRPVKFVQDNHSRSVKGVLRG
LHYQIQQPQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGF
VVLSESAEFLYKTTDYWAPEHERSLVWNDASVGIEWPFSEAPSLSAKDQKAVAFEDAEVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacacgcctcgccattccagacgtcatcgtgttcgagcccaaaacattcggc
gacgaacgcggctttttctttgaaagcttcaaccagaaggcattcgaagaggtcgtgggt
cggcctgtgaagttcgttcaggacaaccactctcgttcagtaaaaggtgtactgaggggc
ctgcattatcaaattcaacagccccagggcaagcttgtacgcgtaaccgtaggcgaggtg
tttgacgtcgccgtcgacctgcgcaagagctccccgaccttcggcaaatgggtgggcctg
catctcaccgccgaaaacaaaaaacagttgtggatcccggaaggctttgctcacggcttt
gtcgtgctgtccgaaagcgccgagttcttgtacaagaccactgactactgggcgcctgag
catgagcgcagcctggtgtggaacgacgcaagcgtaggcatcgaatggccattcagcgaa
gctccctccctctccgcaaaggaccagaaagccgtcgccttcgaagacgctgaggtattc
gcgtaa
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