Proteus columbae: F1325_05455
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Entry
F1325_05455 CDS
T06419
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pcol
Proteus columbae
Pathway
pcol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1325_05455 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_05455 (uvrB)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1325_05455 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1325_05455 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF1192
DUF87
Motif
Other DBs
NCBI-ProteinID:
QHN09934
UniProt:
A0A6I7D5D8
LinkDB
All DBs
Position
1172967..1174976
Genome browser
AA seq
669 aa
AA seq
DB search
MSKDFKLHSEFKPGGDQPAAIASLCEGLDDGLAHQTLLGVTGSGKTFTIANVIANLNRPT
MVLAPNKTLAAQLYSEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERKDVIVVSSVSAIYGLGDPDSYLKMMLHLTNGMIIDQRAILRRLADLQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDYALRVELFDEEVERLSLFDPLTGQIHYNVPR
FTVYPKTHYVTPRERILEAMEEIKKELADRRKVLLANDKLVEEQRVTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPANGLLVIDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGDEIVEQVVRPTGLLD
PIVEVRPVATQVDDLLSEIRIRAAKNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLEGKAILYGDKITDSMARAISETERRREKQQQFNLEHGIVPKGLNKKVGDILKIG
QPSQGRNKKGHKAIEIHDNYPLLSTAELEKEIQRLEAEMYQYAKDLEFEKAASTRDKLQA
LRAQFIANS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagatttcaaactgcattctgaatttaaaccaggtggtgatcaacctgccgct
attgcctcactctgtgaaggattagatgatggtcttgctcatcaaactcttttaggggta
acaggttcaggtaaaacttttacgattgccaatgtgattgccaatctaaatcgtccgact
atggtgttagcgccaaataaaacattggcggcacagctttatagtgagatgaaagaattc
ttccctgaaaatgcagtggaatactttgtttcttattatgattattatcagccagaagcg
tatgttccaagctctgatacctttattgaaaaagatgcttctgttaacgaacatatcgag
caaatgcgcttatctgctactaaagccttgctagaacgtaaagacgtcattgtggtgtca
tccgtgtcagccatttatggtttaggtgatcccgatagctatttaaaaatgatgcttcac
ctgactaacggcatgataatcgaccagcgtgccattttacgccgtttagctgacttacaa
tatactcgtaatgatcaagcctttcagcggggcacatttcgtgtccgtggtgaagtgatt
gatatctttcctgctgaatctgatgattatgcattacgtgttgaactatttgatgaagaa
gtcgaacgcctttcactgtttgaccctttaacggggcaaattcactacaatgtgcctcgt
tttactgtttatcctaaaacgcactatgtcacacctcgtgaacgtattcttgaagcgatg
gaagaaatcaaaaaagaactcgcagatagacgcaaagtacttttagctaacgataaactt
gttgaagaacaacgggtgacacagcgtactcaatttgatctcgaaatgatgaatgagttg
ggatattgctccggtattgaaaactattcacgctatttatcaggtagaggccccggtgag
ccaccaccaaccctatttgattaccttcctgctaacggtttactcgtaattgatgaatca
cacgttactattcctcaaattggtggaatgtataaaggcgaccgttcccgtaaagaaacc
ttagttgaatatggcttccgtttaccttctgcgcttgataaccgtccattacgttttgaa
gagtttgaggcgttagcaccacaaacgatttatgtttcagcaacaccgggtaaatatgaa
cttgaaaaatcgggtgatgaaattgttgagcaagttgtaagaccaacaggtttacttgat
ccgattgttgaagtgcggcctgtggcaacacaagttgatgatttactttctgaaattcgt
attcgtgcagcgaaaaacgaacgtgtattagtaacaacactgacaaaacggatggcagaa
gatttaacggaatatcttgaagagcacggtgaacgtgttcgctatttgcactctgatatt
gatacggttgagcgtgtcgaaatcattcgtgatttgcgcttaggtgagtttgatgtatta
gtgggtatcaacttactccgagaaggtttggatatgccagaggtctctttggtggcgatc
ttagatgctgataaagagggtttcttacgttcagagcgttcattgattcagacaattggt
cgtgcggctcgtaatcttgaaggtaaagcgattttatatggcgataaaattaccgattca
atggcaagagcaataagtgaaactgaacgtcgtcgtgagaaacagcaacagtttaacctt
gagcacggcattgtgcctaaaggattaaataagaaagttggtgatattctcaagattggt
cagccttctcagggacgcaataaaaaagggcacaaagcaatagagattcatgataattat
ccgttgttatcaacggctgaattggaaaaagagatccaacgtttagaagccgaaatgtat
caatatgcaaaagatcttgaatttgagaaagcggcgagtactcgtgataagttgcaagcg
ttacgtgctcaatttattgctaactcttaa
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integrated database retrieval system
