Proteus columbae: F1325_14615
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Entry
F1325_14615 CDS
T06419
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcol03016
]
F1325_14615 (truD)
Enzymes [BR:
pcol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
F1325_14615 (truD)
Transfer RNA biogenesis [BR:
pcol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1325_14615 (truD)
Prokaryotic type
F1325_14615 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
QHN11617
UniProt:
A0A6I7DFL2
LinkDB
All DBs
Position
complement(3101791..3102843)
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AA seq
350 aa
AA seq
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MSDLPELHWLHGKPQATGLLKSIPEDFIVCEDLGFTLDGEGEHVMVKIRKTGCNTAFVAE
KLAKFVGIHPRDASYAGLKDRNAVTEQWFCLRMPGKEMPDFSQLVLEGCEILETTRQQRK
LRIGTLKGNHFTLVLREISDRDFVDTRLAQIKAKGIPNYFGAQRFGRNGDNLRQAMRWAT
DEIRVKERGKRSFYLSAARSAMFNHIVSKRLEYDLYSKVILGDAMQLHGRGSWFVVDEAE
LAQTQTRYEEHDVHITAPLPGKGDLGTQSQALDFETENLAEYEVFWSLARQERVDNTRRA
INVLPENMSWNWVDDTTVSLSFFLPAGSFATSVVRELILLGNDDAENIGE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacctgaactccattggttacatggaaaaccacaagcaacaggcttacta
aagtcaattcctgaagattttattgtctgtgaagatcttggcttcacccttgatggtgaa
ggcgagcatgtcatggtgaaaatcagaaaaacaggttgtaacacggcttttgttgctgaa
aaattagcaaaatttgtaggtattcatccgcgtgatgccagttacgctggactaaaagac
agaaatgctgttactgaacaatggttttgcctgcgaatgccgggtaaagagatgcccgat
tttagtcagcttgttttagaaggttgtgaaattctagaaacgactcgccaacaacgtaaa
ttacgtataggaacgctaaaaggtaatcactttacattggtgttacgagaaatttctgat
cgcgattttgttgatactcgattagcgcaaataaaagcaaaaggtattcctaactatttt
ggtgctcaacgattcggtcgtaatggtgataatttacgacaagccatgcgttgggcaacg
gacgaaatccgcgtaaaagaacgaggaaaacgtagcttttatctctcagcagcccgtagt
gcgatgtttaatcatattgtcagcaaaagattggaatatgatttatattcaaaagtgata
ctcggtgatgcaatgcagcttcatggaagaggtagctggtttgttgttgatgaagcagaa
ttggctcaaacacaaactcgttatgaagagcatgatgttcatattacggcacctttgcca
ggtaaaggtgatttaggtacacaatcacaagcattggattttgaaactgaaaatctggca
gaatatgaagtcttctggtcactagctcgacaagaacgcgttgataatacaagacgtgct
atcaatgtattaccagaaaatatgtcatggaattgggtagacgacaccactgtttctctg
tcattctttttacccgcaggaagctttgcaactagcgttgtacgtgaattaattttatta
gggaatgatgatgctgaaaatattggtgagtaa
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