Pandoraea commovens: NTU39_09750
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Entry
NTU39_09750 CDS
T08365
Name
(GenBank) aconitase family protein
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00290
Valine, leucine and isoleucine biosynthesis
pcom00660
C5-Branched dibasic acid metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01210
2-Oxocarboxylic acid metabolism
pcom01230
Biosynthesis of amino acids
Module
pcom_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
NTU39_09750
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
NTU39_09750
Enzymes [BR:
pcom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
NTU39_09750
4.2.1.35 (R)-2-methylmalate dehydratase
NTU39_09750
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Gene cluster
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Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
UVA81257
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Position
2069012..2071057
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AA seq
681 aa
AA seq
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MQATVRLNGRVLWLSASAEAMTRQLRGETLTRAEAGTLRDQISTDEMTPARACLAFDESL
GDYVYVGLRCHDDSSDATGVFPVTQKAVREGGFALSVAGLRRGKGSSREASPFAERCAGI
RIVIAESFERIYAQNCQNLGLLMSTDLTLAERLQDGETIPIEAFLEDCDPLAEAIVRSGG
LFGYTQRRLCGELLPPQPAHAPGAMTYGEKIIARALGVARVRAGDAVFVPADWRFSHEYV
TPMAVSFLRHAYGNEIPVLRDVDSVLCFEDHLTHLDAVSADGSRPPQIVDAARRFGTVQR
EFCAQHGLRLHGRAAAGGSEGICHALMLERYALPGQVIVGTDSHTPHCGAIGAFAFGVGA
TEMANAWLTGDARLAVPGTCLVHLRARLPAGVGAKDLALHLLHLPYIRDGRAIGQIIEFA
GEAVAHLSTDERATLTNMVAEIGGLTGLVVPDAETVRYLRERRGIDFTLDAWMKSDPQAS
YAHVIEIDCASLGAMVASPGDPGNGIALADLSAEVAIDIAYGGSCTGSKRDDLRACHDVL
AWGLTQGHRVADGVRFYLQYGSEDVRAWCEAQGYADVFKAAGVTMLSPGCGACVNAGPGV
SKTSDEVVISAQNRNFPGRSGPGQMWLGSPATVAASALAGYIVGFDQLQRDGFTSHPVSH
PAALAAPGRGSSGASHAGRGG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaccgtgcgactgaacggccgtgtgctgtggttgagcgccagtgccgaagcc
atgacccgtcaattgaggggggaaacgctgacgcgagccgaagccggaacactgcgcgac
cagatttccaccgacgaaatgacaccggcgcgcgcttgtctggcgtttgacgaatcgctt
ggcgattacgtctacgtagggttgcgatgccatgacgattcgagcgacgcaacaggcgtg
tttcctgtcacacagaaggcggtgcgcgaaggcggttttgcgttgtccgtggcggggctg
cgacgtggcaagggatcgtcgcgtgaagccagcccgttcgcagaacggtgcgccggtatc
cgtatcgtgatcgccgagagcttcgagcgcatctatgcgcagaactgtcagaacctcggt
ctgctgatgtcgaccgatctgacgttggctgagcgtttgcaggatggcgagacgatcccc
atcgaagcgtttctcgaagattgcgatccactggccgaggccatcgtgcgtagcggtggg
ctgttcggctatacgcagcgaaggttgtgcggagaactcttaccgccgcagcctgcgcat
gcccccggcgcgatgacttacggagaaaagatcattgcgcgagcgctgggcgttgcccgc
gtacgggcgggagatgcggtgttcgtccccgcagactggcgcttctcgcatgaatacgtg
acgccgatggccgtgagtttcctgcgccacgcctatggcaacgagatacctgtgctacgc
gatgtcgattcggtgctgtgctttgaagaccatctgacgcatctcgatgctgtctccgcc
gatggcagtcggccgccgcaaatcgtggacgccgcacgacgttttggcacggtacagcgc
gagttttgcgcccagcatgggctgcgtctgcacggccgcgccgcagcgggtggttcggaa
ggcatctgccacgcgttgatgctcgagcgctatgcgttgccgggacaggtgattgtcggc
accgattcacacacaccgcattgtggtgccatcggtgcgttcgctttcggtgtcggtgcg
accgaaatggccaatgcgtggctcaccggagacgcacgactcgccgtgcccggtacgtgc
cttgtacatctgcgcgcgcgcttgcctgcgggcgtcggcgcgaaagatctggccttgcac
ctgcttcatcttccttacattcgcgacggacgcgccatcgggcagatcatcgagttcgct
ggcgaagccgttgcacacctgtcgactgacgagcgcgcgacgctgaccaacatggtggcc
gaaatcggcggactcaccggactggtggtgccggacgcggaaacggtccgctacctgcgc
gagcggcgcggcatcgacttcacgctcgacgcatggatgaaaagcgatccgcaagcatcg
tacgcccatgtcatcgagatcgattgcgcgtcgctgggggcgatggtggcgagtcccgga
gatccgggcaacggcattgcgctggcggatttgtcggcagaggtcgccatcgatattgct
tacggcgggtcgtgcaccggcagtaagcgcgacgatctgcgggcctgccatgacgttctt
gcctggggattgacgcaagggcaccgcgttgcagacggcgtgcgcttctacctgcagtac
ggcagcgaagacgtgcgcgcatggtgtgaggcgcaggggtatgcggatgttttcaaggcg
gcaggcgtgacgatgctctcgcccggatgtggtgcgtgcgtcaatgccggaccgggcgtt
tccaaaacgtccgacgaggtggtcatcagcgcccagaatcgcaatttccccgggcgttcg
ggccccggacagatgtggcttggcagcccggccaccgtggccgcgagcgctttggcggga
tatatcgtgggtttcgatcaattacaacgcgatggatttacgtctcatccggtctctcat
cccgcagcgcttgcagcgccgggccgaggttccagtggggcgtcgcacgcgggcagggga
gggtag
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