Pandoraea commovens: NTU39_18650
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Entry
NTU39_18650 CDS
T08365
Name
(GenBank) aconitase family protein
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00290
Valine, leucine and isoleucine biosynthesis
pcom00660
C5-Branched dibasic acid metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01210
2-Oxocarboxylic acid metabolism
pcom01230
Biosynthesis of amino acids
Module
pcom_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
NTU39_18650
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
NTU39_18650
Enzymes [BR:
pcom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
NTU39_18650
4.2.1.35 (R)-2-methylmalate dehydratase
NTU39_18650
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
DUF6699
Motif
Other DBs
NCBI-ProteinID:
UVA78086
LinkDB
All DBs
Position
complement(4146188..4148146)
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AA seq
652 aa
AA seq
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MEDIIRFDGRVLFLSDDPAIVRRQLSGESVTRAEAGVLRDNVSTDEITPVTVMLTYDERL
GRYPYVGFKAGNEMPVGEHEVRRGGFQVTVAGKRYGKGSSRESSPLAELSAGIRLIVAES
FERIYQQNCDNIGILTTTDFGVLDRILAGEAIPITEFLKGRDALTQQIIRSGGLLAYSKF
AEWPAPRAHDDAATTPTQSPRTLVEKIMARRLHPATPGAEHGDGVFVRVDWRFSHDYFTG
MCAHLMHRAFGEPAALHDPARIIAFQDHLVLAAQSFPHVSQGLLPGVANLTSGHREFVAR
YPVLAHGQLADDGEHGADGICHALMAERYALPGQIVIGTDSHTPHAGALGCLAFGAGATD
IANSWVTGYVRCKVPQTLRIEIDGDLAPGVTAKDVVLHLLRLDAIRSGGAIGLVFEYAGS
AVRAMSVDERATLTNMVAELGGFTGIVAPDEKTVAFLKERRGIDFTLEPWMTSDVGARYR
DVIRIDAAALTPMLARPGDPGNGVALAELDAPVAIDIAYGGSCTAGKRDDFDAYHDVLAW
GVAHGLRVAQGRSLFLQFGTMDVRAYCEVQGYLKTFEEAGVTLIMPGCGACANCGPGQST
SAAQVTISAINRNFPGRSGPGSVWLASPYTVAASALAGRIVSFDELKATALQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcattcgtttcgatggccgcgtgctgtttctgtccgacgacccggccatc
gtgcgccgccagttgtcgggcgagtccgtcacgcgcgccgaggctggcgtgctgcgcgac
aacgtttcaacggacgaaatcacgcccgtcaccgtcatgctgacgtacgacgagcgactc
ggtcgctatccgtacgtcggtttcaaagcgggaaacgagatgcccgtgggcgagcacgag
gtgcgtcgcggtggttttcaggtcaccgtcgctggcaagcgctatggcaagggctcgtcg
cgtgagtcgagcccgctggcggagttgtcggcgggtatccgtctgatcgttgccgagagc
ttcgagcgcatctatcagcagaactgcgacaacatcggcattctgacgacgaccgatttc
ggtgtgctcgaccgcattctcgcgggcgaagccattccgattaccgaatttctcaagggg
cgcgatgccctcacgcagcagatcatccgcagcggcggtctgctcgcgtacagcaagttt
gcggagtggcctgcgccgcgtgcgcatgacgacgcagcgacgacgccaacccagtcgccc
cgcaccctcgtagaaaagatcatggcgcgccgcctgcatccggccacgccgggtgccgag
catggcgacggcgtgttcgtgcgcgtcgactggcgtttctcacatgattacttcacgggg
atgtgcgcgcatttgatgcatcgtgcattcggtgaaccggcggcgctgcacgatccggcg
cgcatcatcgcgtttcaggaccatctggtgctcgcggcgcagagtttcccgcacgtctcg
caagggctgttgcccggtgtcgcgaatctgactagcggtcatcgcgagttcgtcgcgcgc
tatccggtgctggcgcacgggcaactcgcagacgacggtgaacacggtgccgacggcatc
tgccacgcgctcatggccgagcgctacgcgttgcccggccagatcgtgatcggtaccgac
tcgcatacgccgcacgcgggcgcgctcggttgcctcgcgttcggcgcgggggctacggac
atcgcgaacagctgggtgacgggctacgtgcgctgcaaggtgccgcagacgttgcgcatc
gagatcgacggcgacctcgcgccgggtgtgacggccaaggacgtcgtgctgcatctgctg
cgcctcgacgccatccgaagcggcggcgccatcggcctcgtcttcgaatatgcggggagt
gccgtacgggccatgtcggtcgacgagcgcgccacgctcaccaatatggtggccgagctg
ggcggctttaccggcatcgtcgcaccggatgagaaaacggtggcgttcctcaaggagcgg
cgaggcatcgacttcacgctcgaaccgtggatgacgagcgacgtcggtgcgcgctatcgc
gacgtgatccgcatcgatgccgccgcgctcacgccaatgctcgcgcgtccgggcgacccc
ggcaacggcgtggcgctcgccgagttggacgctcccgtcgccatcgacatcgcctacggc
ggttcctgcaccgcaggcaagcgcgacgacttcgacgcttatcacgacgtgctcgcgtgg
ggtgtcgcccacggactgcgcgtcgcacaggggcggtcgctgttcctgcaattcggcacg
atggacgtgcgcgcctactgcgaggtgcaaggctatctgaagacgttcgaagaagcgggc
gtgacgctcatcatgccgggctgcggcgcgtgtgcgaactgcgggccggggcaatcgacg
tcggcggcgcaggtcacgatcagcgcgatcaaccgcaacttcccgggacgctcggggccg
ggcagcgtctggctcgcgagtccgtatacggtcgcggcgagcgcgctggcggggcgcatc
gtcagcttcgacgaattgaaagcgacggcattgcagtaa
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