Pandoraea commovens: NTU39_19675
Help
Entry
NTU39_19675 CDS
T08365
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcom
Pandoraea commovens
Pathway
pcom01501
beta-Lactam resistance
pcom01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NTU39_19675
01503 Cationic antimicrobial peptide (CAMP) resistance
NTU39_19675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_19675
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_19675
Transporters [BR:
pcom02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NTU39_19675
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NTU39_19675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
DUF3561
Motif
Other DBs
NCBI-ProteinID:
UVA78272
LinkDB
All DBs
Position
complement(4372038..4375217)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIVIMLAGALSILKLPVSQYPPIAPPSVQITATYPGASAQTVQDT
VTQVIEQQMNGIDHLEYMSSTSDGSGTAQITLTFAQGTNPDIAQVQVQNKLQLATPLLPQ
QVQQQGIKVAKATKNFLLVIGAYSDDGNMTDIDLANYIAANVQDPISRVNGVGQVQLFGS
QYAMRVWVDPQKLNGYNLTVIDVSNAIQSQNVQISAGELGGAPAVKGQQLNATVTAQSRL
QTPEQFRKILLKVNKDGSQVRLGDVARIELGGESYQVVARYNGKPAAGLAITLATGANAL
QTATAVKQAVTELEPYFPQGMKVDYPYDTTPFVKISIEEVIKTLIEGIVLVFLVMYLFLQ
NLRATIIPTIAVPVVLLGTFGIMGAAGFSINTLSMFGLVLAIGLLVDDAIVVVENVERVM
AEEGLSPKEATKKAMDQIVGALVGVALVLSAVFVPMAFFGGSTGAIYRQFSLTIVAAMAL
SVLVAIVLTPAMCATILKPIKKGEVHEKRGFFGWFNRKFDSGSKAYQGQVERLLKRTTPL
LIVYVVIVAVVGFLFVRMPTAFLPDEDQGYFFNLVQLPPGATQERTLDVMKQVEKHYLEK
EKDSVRSIFTVTGFGFNGRGQNVGLAFTMMKPWEDRQASDLKVQAVIARSYQAFASVKDA
MIFAINPPSVPELGNAGGIDFELQDRAGLGHDALMAARNQLLGMAAKNPNLANMRPNGLD
DTPQYKVDVDEEKAAALGLSIADVYQTLSASWGSSYVNDFIDRGRVKKVYVMAEPKDRML
PQDINKLFVRNSSGTMVPFSAFATGKWTYGSPRLERYNGVPAVEIQGMPAPGKSSGDAMK
AVEEIAKQLPPGIGLEWTGLSFEERISGSQAPALYAISILIVFLCLAALYESWSIPFSVI
LVVPLGVLGALLAATLRGLSNDVYFQVGLLTTVGLSAKNAILIVEFAKDLQEQGRTLMEA
TMEAVRLRLRPILMTSMAFILGVLPLAISNGAGSASQHAIGTGVIGGMLAATFLAIYYVP
VFFVLVRKRFAHEDLDTVEHPEARHENPDATNGPAKEGN
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcgcccgatttttgcttgggtgatcgccattgtcatcatg
ctggccggtgcgctttcgattctgaagctgccggtctcgcagtacccgccgatcgcaccg
ccgtccgtgcagatcaccgcgacctatccgggcgcttcggcgcagaccgtgcaggatacg
gtcacgcaggtgatcgagcagcagatgaacggtatcgatcaccttgagtacatgtcgtcg
acgtccgacggctcgggtaccgcccagatcacgctgacgttcgctcagggcacgaacccg
gacatcgcccaggtgcaggtgcagaacaaactgcaactcgccacgccgctgctgccgcag
caggtgcaacagcagggtatcaaggtggcgaaagcgaccaagaacttcctgctggtgatc
ggcgcgtattccgatgacggcaatatgaccgacatcgacctggcgaactacattgcagcc
aacgtgcaggatccgatcagccgtgtgaacggtgtgggtcaggtccagctgttcggttcg
cagtacgccatgcgcgtgtgggtcgatccgcagaagctcaacggctacaacctgacggtc
atcgacgtctcgaacgccattcaatcgcagaacgtgcagatctcggccggtgagctgggt
ggcgcgcctgcggtgaagggccagcagctcaatgcgaccgtgacggcgcaaagccgtctg
caaacgccggagcagttccgcaagattctgctcaaggtcaataaggacggctcgcaagtg
cgtctgggtgacgtggcgcgcatcgagctgggcggcgagtcgtatcaggtcgtggcacgt
tacaacggcaagccggccgccggtctggcgattacgctggccaccggtgcgaacgcgctg
cagacggccaccgccgtcaagcaggcggtcaccgaactcgaaccgtacttcccgcagggc
atgaaggtcgactatccgtacgacaccacgccgttcgtgaagatctcgatcgaggaagtg
atcaagaccctcatcgaaggtatcgtgctcgtgttcctcgtgatgtatctgttcctgcag
aacctgcgggcaacgatcatcccgacgatcgcggtgccggtggtgctgctcggtacgttc
ggcatcatgggtgcggcgggcttctccatcaacacgctatcgatgttcggccttgtgctc
gccatcggtctgctcgtcgacgatgccattgtggtggtcgaaaacgtcgagcgggtgatg
gcggaagaagggctgagtccaaaagaagcgacgaagaaagcgatggatcagatcgtcggt
gcgctggtgggtgtggcgctcgtgctctcggccgtgttcgtgccgatggcattcttcggc
ggctcgaccggtgctatctatcgtcagttctcgctgaccatcgtggcggccatggcgttg
tcggtgcttgtggctatcgtgctcacgccggccatgtgcgcaacgatcctcaagccgatc
aagaagggtgaggttcacgagaagcgcggcttcttcggctggttcaaccgcaagttcgac
agcggttcgaaggcctatcagggtcaggtggagcgcttgctcaagcgcaccacgccgctc
ttgatcgtctacgtggtgatcgtggcggtcgtcggcttcctgttcgtgcgtatgccgacg
gcgttcttgccggacgaagaccagggttacttcttcaaccttgtgcaattgccgccgggt
gcgacgcaggagcgtacgctcgacgtcatgaagcaggtcgagaagcattacctcgagaag
gaaaaggactcggttcgttcgatcttcacggtgacgggcttcggctttaacggccgtggt
cagaacgtgggtctggcgttcacgatgatgaagccgtgggaggaccgtcaggcatccgac
ctcaaggtgcaggccgtgattgcgcgttcctaccaggcgttcgccagcgtgaaggacgcc
atgatcttcgcgatcaacccgccgtcggtgccggaactcggtaacgcgggcggtatcgac
ttcgagttgcaggatcgtgcaggtctgggtcacgacgccctgatggccgcccgtaatcag
ttgctgggcatggcggcgaagaacccgaatctggcgaacatgcgcccgaacggtctggac
gacacgccgcagtacaaggtcgacgtcgacgaagaaaaggccgctgcactgggtctgtcg
attgccgacgtgtaccagacgttgtcggcatcgtggggctcgtcgtacgtgaacgacttc
atcgaccgcggtcgtgtgaagaaggtgtacgtgatggcggaaccgaaggaccggatgctg
ccgcaggacatcaacaagctcttcgtgcgtaacagcagcgggacgatggtgccgttctcg
gccttcgccacgggcaagtggacgtacggttcgccacgtctggaacgctacaacggtgtg
cctgccgtggaaattcagggtatgccggcaccgggcaagtcgtcgggcgacgcgatgaag
gcggtggaagaaatcgcgaagcaactcccgccgggtatcggtctggagtggacggggctg
tcgttcgaagagcgtatttcgggctcgcaggcaccggcgctgtatgcgatctccatcctg
atcgtgttcttgtgcctggctgccttgtacgaaagctggtcgatcccgttctcggtgatt
ctggtggtgccgctgggcgtgttgggtgcactgctggccgccacgttgcgcgggttgtcc
aacgacgtgtacttccaggtgggtctgctcactaccgtgggtctgtcggcgaagaacgca
attctgatcgtggaattcgccaaggatctgcaagagcagggccgcacgctgatggaagcg
acgatggaagccgtgcgactgcgtctgcgaccgattctgatgacgtcgatggcgttcatt
ctcggtgtgctgccgctggcgatctccaacggggccggttcggcttcgcagcacgccatc
ggtacgggcgtgatcggcggtatgctcgccgcgacgttcctcgcgatctactacgtgccg
gtcttcttcgtgttggtgcgtaagcgcttcgcccatgaggatctggacacggtggaacat
ccggaagcgcgtcatgagaacccggacgcaaccaacggtcccgccaaggaaggaaactga
DBGET
integrated database retrieval system
