Phocaeicola coprophilus: I6J50_17335
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Entry
I6J50_17335 CDS
T07209
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop01501
beta-Lactam resistance
pcop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J50_17335
01503 Cationic antimicrobial peptide (CAMP) resistance
I6J50_17335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcop02000
]
I6J50_17335
01504 Antimicrobial resistance genes [BR:
pcop01504
]
I6J50_17335
Transporters [BR:
pcop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6J50_17335
Antimicrobial resistance genes [BR:
pcop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6J50_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QRO24695
LinkDB
All DBs
Position
complement(4046637..4049672)
Genome browser
AA seq
1011 aa
AA seq
DB search
MNISELSIRRPVLATVLTIIILLFGLIGYTTLGVREYPSVDNPIISVSCSYPGANAEVIE
NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP
RDCDPPTVSKADADATPILMVAIQSDSRSLLELSEIADLTVKEQLQTISNVSSVSIWGEK
RYSMRLWLDPNKLAGYGITPVDIKNAITNENLELPSGSIEGNTVELTLRTMGQMHTAKEF
NNVIIKEVNGQVIRFSDIGYAELGAADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAVY
ERMEQMRKDLPEDVTYSYGFDSTKFIRASIAEVESTVYEAFVLVIIIIFLFLRDWRVTLI
PCIVIPVSLIGAFFVMYVAGFSINVLTMLAVVLSVGLVVDDAIVMTENIYIRIEKGMKPF
DAGIEGAKEIFFAVISTTITLVAVFLPIVFMEGTSGRLFREFSFVVAGSVIISSFAALTF
TPMLATKLLIKREKQGWFYRKTEPFFEGMNRIYGRSLDKFLSKRVIAIPFTLITLVLIAF
LWNKIPAEMAPLEDRSKITISTRAAEGASYEYIRDYTEDINDLVDSIVPDAAAVTARVSS
GSGNIQITLKDIQDRDYTQMQVAEKISKAIRTKTKARTFVQQQSSFGGRRSSMPVQYVLQ
AVSIDKLEKVLPEFLNRVYDNPTFQMADVDLKFSSPEMRVNINRDKAGSMGVNVRDIAET
LQYGLSGQRMGYFYMNGKQYEILGQINRQQRNQPANIKSIYIRNDKGQMIQMDNLVEFVE
AIAPPKLYHYNRFISATISAGLAEGKTIGEGLDEMDKIASEVLDETFRTALSGDSKDYRE
SSSSLMFAFILALVLIYLILAAQFESFKDPFIIMLTVPLAIAGALVFMFFGDITMNIFSQ
IGIIMLIGLVAKNGILIVEFANQKQEAGENKMQAIRDAALQRLRPILMTSASTILGLLPL
TFATGEGANQRIAMGTAVVGGMLVSTFLTMYIVPAIYSYISTNREKKENKV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttccgaacttagcatacgcaggcccgtattggccactgtgcttaccatcatt
attctgcttttcggtctgatcggctataccacactgggagtacgtgaatatccctctgtc
gacaatcccatcatttccgtatcatgcagctatccgggagccaatgccgaagtcatagag
aatcagattacggaaccgcttgaacagaacatcaacggtattccgggtatccggtccctt
tccagtgtgagccagcagggacaaagccgtattaccgtagaattcgaattatctgtcgat
ctggaaacagccgccaatgatgtgcgcgataaggtttcgcgggctcaacgttacctcccg
cgtgactgcgaccctcctaccgtatccaaggctgatgctgatgctacgccgatcctgatg
gttgccattcagagtgacagccgttcgcttcttgaactgagtgaaatagccgacctgact
gtcaaggaacagttacagaccatttccaatgtgagcagcgtttccatctggggtgagaaa
agatattccatgcgtttgtggctggatcctaacaaactggccggttatggaattactccc
gtagacatcaagaatgccatcaccaatgaaaatctggagctaccttccggcagcattgaa
ggtaataccgtggaactgaccttacgcaccatgggacagatgcacacggccaaggaattc
aataacgtaatcattaaggaagtcaacggacaagtaatccgcttcagcgatatcggttat
gccgaactgggagcagccgatataaagagttacatgaaaatgaacggcgtgcccatggta
ggtgttgttgtcattccccaaccgggagccaaccacattgaaattgcagatgccgtctac
gaacgcatggaacaaatgcgcaaggaccttcctgaagacgtaacatacagttatggattc
gacagcaccaagttcatccgtgcctccattgccgaggttgagagtaccgtgtacgaagcc
ttcgtactggttatcattattatcttcctcttcctccgcgactggcgtgtaaccttgatc
ccgtgcattgtcatccccgtgtcactgatcggagcgttcttcgttatgtatgtggccggt
ttctccatcaatgtcctgaccatgctggccgttgttctgtcggtgggtctggtggtggac
gatgccatcgttatgaccgagaacatttatatccgtattgaaaaaggaatgaaacctttt
gatgccggtatcgaaggagccaaggaaattttctttgcggtcatttccacgaccatcacg
ctggtagccgtattcctccccattgtatttatggaaggaaccagcggccgcctgtttcgc
gaattcagttttgtagttgccggttctgtgattatttcttccttcgctgcattgactttc
accccgatgctggcgaccaaattattgatcaaacgagaaaagcaaggatggttctaccgg
aagacagagcctttctttgaaggcatgaaccggatttacggccgttcgctggacaaattt
ctcagcaaacgggtcattgcaattccctttaccctgattacacttgtcttgattgccttc
ctgtggaataagattccggctgaaatggctcccctggaagaccgttcaaaaattacgatc
agtacaagagctgccgaaggagccagctacgaatacatccgcgattatacggaagacatc
aacgatctggttgactccatcgttccggatgcagcagctgtaaccgcccgtgtatccagc
ggaagtggaaacatccagattactctgaaagatattcaggatcgtgactacacccagatg
caggtggcagaaaagatctccaaagccatccgtaccaagaccaaggccagaacattcgtc
caacagcagtcttcctttggaggacgtcgaagcagtatgccggtacaatatgtcttgcag
gctgtcagtatcgacaagctggaaaaggtccttcctgaattcctgaatcgggtatatgat
aatccgacgttccagatggccgatgtcgatctgaagttcagcagccctgaaatgcgggtg
aacatcaaccgcgacaaggcaggaagtatgggagtcaacgtacgcgatattgccgaaacg
ctgcaatacggactgagcggacagcgcatgggatatttttacatgaacggaaaacaatat
gagatcctgggacagatcaaccgtcagcaacgtaaccagcctgccaacatcaagtccatt
tatatccggaatgacaagggacaaatgattcagatggacaatctcgtagagttcgtcgag
gctattgcaccgccgaaactctatcactacaaccgtttcatttcagccaccatctctgcg
ggacttgccgaaggaaagaccatcggagaaggacttgacgaaatggacaagattgcttcg
gaggtattggatgaaacattccgtactgctttgtccggagattccaaggattaccgggaa
agttcatccagtctgatgtttgcgttcatcctggcactggtcctgatttatctgattctg
gccgctcagttcgagagtttcaaggatccgttcatcattatgcttaccgttcctctggcc
attgccggagctttggtcttcatgttcttcggcgacataacaatgaacatcttcagtcag
atcggtatcatcatgctgatcggtcttgttgccaagaatggtattctgatcgttgagttt
gccaatcagaaacaggaagcgggagaaaacaagatgcaagccatacgggatgctgcctta
caacgtctgcgtccgatcctgatgacaagtgcatctactatcctgggattacttcccctc
acctttgctaccggtgaaggagccaatcagcgtattgccatgggtacagccgttgtggga
ggaatgctggtatctaccttcctgaccatgtacatcgttccggcaatttattcatatata
tctaccaaccgtgaaaagaaggaaaacaaagtatga
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