Propithecus coquereli (Coquerel's sifaka): 105805121
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Entry
105805121 CDS
T08746
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105805121 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105805121 (LIG4)
Enzymes [BR:
pcoq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105805121 (LIG4)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105805121 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
105805121
NCBI-ProteinID:
XP_012493388
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAVIAYFVLRPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTILSVFHNDAVELHSVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQTFYIETKLDGERMQMHKDGTKYKYFSRNGYNYTD
QFGASPDEGSLSPFIHNAFKTDIQVCILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSELMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPSGENPSVFHTLSRVGSGYTMKELYDLGLKLAKHWKPFHKKTPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHFYVGIDDEPQEKKRKVAPKMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGTDSHPKTDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVRNIISADEHDV
VKPVWLLECFKAKSCVPWQPRFMIHMCPSTKKHFAREYDCYGDSYFVDTDLKQLKEVFSG
IKNSDEQTPEEMSSVIADLEYRYSWDHSPLSIFRRHTIYLDLYSVINDLSTKTKGTRLAI
QALELQFHGAKVVSCLAEGVSHVIVGEDHSRVANFKAFRRNFKRKFKILKEDWVTDSIDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcacgatgcccttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcaactagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagaaggtaaagatgcccttaaacttttaaattacagaacacccactggaactcgtgga
gatgctggagactttgcagtgattgcctacttcgtgttgaggccaagatgtttacagaaa
ggaagtttaactatacagcaagtaaatgaccttttagactccgttgccagcaataattct
gctaaaagaaaagacctaataaagaagagtcttcttcaacttataactcagagttcagca
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatactttctgtttttcataatgatgctgttgagttgcatagtgtcaccacagat
ctggaaaaagtctgcaggcaacttcatgatccttctgtaggactcagcgatatttctatc
actttattttctgcctttaaaccaatgctagctgctatagcagatattgagcgcattgag
aaggacatgaaacaccagactttctacatcgaaaccaaactagatggtgagcgtatgcaa
atgcacaaagatgggactaaatataaatacttctccagaaatggatataattatactgat
cagtttggtgcttctccagatgaaggttctctttccccattcattcataatgcattcaaa
acagatatacaagtctgtattcttgacggtgagatgatggcctacaaccctaatacgcaa
acttttatgcaaaagggtattaagtttgatattaaaagaatggtagaagattctgatctg
caaacatgttattgtgtttttgatgtattgatggttaataataaaaaactaggacatgag
accctaagaaagaggtatgagatccttagtagtatttttacaccaataccaggtagaata
gaaatagtacaaaaaacacaagctcatactaagaatgaagtaattgatgcattgaatgaa
gcaattgataaaagagaagagggtatcatgataaaacatcctctatccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtgaactaatggat
gaattggacatcttaattgttggaggctattggggtaaaggttcacggggtgggatgatg
tctcattttttgtgtgcagtagcagagaagcccccttctggtgaaaacccatctgtgttt
catactctctctcgtgttggctctggttacaccatgaaagaactgtatgatctgggtttg
aaattggccaaacattggaagccttttcataaaaaaactccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacatcgaaccttgtaactctgtcatcgttcagattaag
gcagcagagatcgtccccagtgacatgtataaaactggctgcacattgcgttttcccaga
atcgaaaagataagagatgacaaagagtggcatgaatgcatgactctggatgacttagag
caacttagggggaaagcatctggaaagcttgcatctaaacacttttatgtaggtatagat
gatgaaccacaggaaaaaaagcggaaagttgccccaaagatgaagaaagttattggaatt
atcgaacacttaaaagcacctaatctttctaatataaacaaagtttctaatatatttgaa
gatgtcgagttttgtgttatgagtggaacagacagccatccaaagactgacctggagaat
agaattgcagaatttggtggttatatagtacagaatccaggcccagacacgtactgtgta
attgcagggtctgagaacatcagggtgagaaacataatttctgcagatgaacatgatgtt
gtcaagcccgtgtggcttttagaatgttttaaggccaaaagctgtgtgccatggcagcct
cgctttatgattcatatgtgtccatcaacaaaaaaacattttgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagatttgaagcaactgaaggaagtattctcagga
attaaaaattctgatgaacagactcctgaagaaatgtcttctgtgattgctgatttagaa
tatcggtattcctgggaccactctcccctcagtatatttcgacgccacaccatttatttg
gatttgtatagtgttattaatgatttgagtaccaaaaccaagggaacaagattagctatt
caagccttggagcttcagtttcatggagcaaaagtagtttcttgtttagctgaaggagtg
tctcatgttatcgttggggaagatcatagtcgagttgcaaattttaaagcttttagaaga
aattttaagagaaagtttaaaatcctaaaagaagattgggtaactgattcaatagacaaa
tgtgaattacaggaggaaaatcaatatttgatttaa
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