Propithecus coquereli (Coquerel's sifaka): 105816634
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Entry
105816634 CDS
T08746
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03013
Nucleocytoplasmic transport
pcoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105816634 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
105816634 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105816634 (THOC1)
03041 Spliceosome [BR:
pcoq03041
]
105816634 (THOC1)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105816634 (THOC1)
Spliceosome [BR:
pcoq03041
]
Complex C
Other components
EJC/TREX
105816634 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105816634 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
105816634
NCBI-ProteinID:
XP_012507571
Ensembl:
ENSPCOG00000009234
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGERWKVLAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLNDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattattgagtacgttcagccagtta
cctggcagtgaaaatgaaaaaaaatgcaccctcgatcaagctttcagaggtgtactagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaagtcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttaagaagattgtctaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggctaggcttttcccgctatctgagaaatcgggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcaa
aagcacactgaggatagagaagaaggaatggatgtagaagaaggggaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattactttaggaaccctgtgcaatgctatgagaagatttcatggaaaactttc
ctcaagtattctgaagaagttttagctgtttttaaaagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttgcaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccaatatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgaacaatcactttggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagataccaaaccaacaagagtagtacggaagagaacggcaccagag
gacttcctagggaaaggacccaacaaaaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggagttctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatataaggctgtgaataattcaaattatggttggagagccctgagactgtta
gcgaggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaggataatgatgctttactgaaagaaaatgaaagt
cctgacgttcggcgagacaaacctgtaacaggagaacaaatagaagtatttgccaacaag
ttgggtgaacgatggaaggttctagctccctatttggaaatgaaagactcagaaattagg
cagattgagtgtgatagtgaagacatgaagatgagagctaagcagctcctagttgcctgg
caagatcaagagggagtacacgccacacccgagaatctgatcaatgcactgaataagtct
ggattgaacgaccttgcagaaagtctgactaacgacaatgagacaaatagttag
DBGET
integrated database retrieval system
