KEGG   Propithecus coquereli (Coquerel's sifaka): 105817272
Entry
105817272         CDS       T08746                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pcoq  Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:pcoq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcoq03400]
    105817272 (MDC1)
DNA repair and recombination proteins [BR:pcoq03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    105817272 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 105817272
NCBI-ProteinID: XP_012508360
LinkDB
Position
Unknown
AA seq 1820 aa
MEDTQVINWDIEEEEETEQSSESLEYSLEPVGRLRIFSGAHGPEKDFPLHVGKNVVGRMP
DCSVPLPFPSISKQHAVIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSYRLRDQEL
ILFADLPCQYHRLDVPLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVESLSERCV
MKESRTTSSPLSTVVPESDEEGPSPGPGGPGPHCAFNLDSDTDEEEGQQTATGEASSAAR
RGAAAEAEQPAADGVATKIQCEKDQPSVKERDNDTKIKKDGGNGVVPVRVILERSQPPGE
DSDTDRDDESRPPGRSAEVHLERAQPCGIIDSDTDVEEEGIPATPAVVPMKKRQIFHGAG
TRGPGAPGLAHLQESQADSDTDMEESEAPQAIPLEKSQTSMLINSDTDDEEEVSAALTLA
RLKESQAVVWNRVMDVEEDRAQPVVLLEQTASGRDSDTDVEEGGLPVEKRETVPEGHTDK
DGTIVIAHSEENQPPPGDSDIGVEADKSSPGIHPERSQASSTVDINTEGEEDVPPGPAVV
HLEKHQVSVEGTYQTDVEAERGPAKLPVVPLEEGQPPLDEDCETDVEEGMSLAASAATDI
RKSRLPAEGDAGTERAAAVLERERALEVGVQGGSPVAQVEQDLLPISVENLTDPVVDTGT
PEEPRQPQREGAQTPAGREREPHVGMTKDSEDNQDDSEDLALQATQCFVERETESLEAVQ
SMEDEPTQAFLITLPPEPGPSHCSFQAPGALDEPWEVLATQPFCLRESEASETQPIATYL
KAHGSCLSPPRATSQDHHPESPVHTEPLGIQGKGMQTVDKGMGIPKEIAERGTPEKGPLE
RETKKLHPRGERDVVGTEELTREIQDREQKQLLARDTQRQESDKKVKSTSPEMDGDSLKV
EVESSKEMQQKEIEKQTLIRGIFEKVESPVPEGECEPAGLEVRGPTVMLNRGTQRGGPEG
GNQDQKGQASCPTPEPGVGIGHLQAPASAPVASGRQSSGERGAQVNPKRQQRGQLNCKTP
PAEKASRENQESPDACLPPTVPEASTPPQDPLLSQSQSHVAPQSLLSAFLPSLEPSIPKT
RQNRSQEASETPSSSELEHFHRKPKVRPQGSSRMTPSPVSSTAHEPHPTTPTAQPVTPEP
TSRTTRGRTNRSSLKTPDPIVFIAPELQPPTSTAQPVTPKPTSRATRGRTNRSSVKTPDS
VVPTALELQPSTSTAQPVTPEPTSRATRGRTNRSSVKTPDPIVPTTPELQPSSSTVQPVT
PKPTSWATRGRTNTSSVKGPEPVVPTAPELQPSTSIDQPVTPKRTSRATRGRTNRSSVKT
PDPIVPTTPELQPSASTAQPVTPKPTSWATKGRTHRSSVKTSKLVEPTTSDLELPTPTDQ
HVTPEAIVQGGQSKTLRSSTISVVPVPTTPEFQSPVTTDQPVSPEPIPQASCSRRQRAAG
KHGSLSAPIVHKTCSASPEPKSPSSRNQKQGAVRAAESLTTIPEPAFPQLLEASQIEKVE
AADRSGFTPEPQPKASQSRKRPLATVDSPPLPKRSQRGEVSQKTAFLKEEEDTAERPGKE
VRRGLGPQSWEKGLRNSHQDLSQFQDVVIPAPGKRKRDQVEEEPKGISSRSLRRTKPNQE
SPVPKVLFTGVVDARGERAVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILS
LDWLHQSRKAGCFLPPDEYVVIDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTPGVQP
PPPQMGEIISCCGGTVLPNMPRSYKPRRIVITCPQDFPRCSIPLRVGLPLLSPEFLLTGV
LKQEAKPQAFVLSTLEMSST
NT seq 5463 nt   +upstreamnt  +downstreamnt
atggaggacacacaggttatcaactgggacattgaagaagaggaggagacagaacaatcc
agtgaatccttggagtacagcttggagcctgtagggcggctgcgtatcttcagtggtgcc
catggaccagaaaaagatttcccactacacgtcgggaagaatgtggtaggccgaatgcct
gactgttctgtgcccctaccctttccatccatctccaaacaacatgcagtgattgaaatc
ttggcctgggacaaggcacctatcctccgagattgtggaagcctcaatggtactcaaatc
ctgaggcctcctaaggttctgagccctggggtgagttatcgtctgagggaccaggaattg
attctctttgctgacttgccctgccagtaccatcgcttggatgtgcccctgccctttgtc
tctcggggtcctctaactgtagaggagacacccagggtacagggaggaactcaacctcag
aggcttctgttggctgaagactcggaggaggaagtagagtccctttctgaaagatgtgtg
atgaaagaatcaaggaccacatcctcccctttgtcaacagtagttccagagagtgatgaa
gaggggccttcccctggcccaggtggccctgggccacattgtgccttcaacttggacagt
gacacagatgaggaggaaggtcagcaaacagcaacaggggaggcctcctccgctgccaga
agaggtgccgctgcagaggcagagcaacctgcagctgatggagttgcaaccaaaatccag
tgtgaaaaggatcagccttcagtgaaagagagggacaatgacacaaaaatcaagaaggat
ggaggaaatggggtggtcccagttagggtgattctggagaggagccaacctcctggggag
gacagtgacacagatagggatgatgagagcaggcctcctggaaggtcagctgaggtccat
ttggaaagggcccagccttgtggcattatcgatagtgatactgatgtggaagaagaggga
atcccagcaaccccagctgtagttcctatgaagaagaggcaaatattccatggagctggt
acaaggggtcctggagcacctggcttggcacatctgcaggagagccaggctgacagtgat
acagatatggaggagagcgaggccccacaggccatccctttggagaaaagccagacttcc
atgctgatcaacagtgatacagatgatgaggaagaagtctcagcagcactcactttggca
cgtctgaaagagagccaggctgttgtatggaacagagttatggatgtggaagaggacagg
gcccaacctgtggtccttctggagcaaactgccagtgggagagacagtgacacagatgtg
gaagagggagggctcccagtagaaaagagagaaaccgtccctgagggtcacacagacaaa
gatggaaccattgttatagcacattcagaagagaaccaacctcctcctggggacagtgat
ataggtgtagaagcagataagagttcacctgggatccacccggagagaagccaagcctcc
agcacggtggacatcaacacagaaggggaggaggatgtcccaccagggccagctgttgta
catctggagaagcatcaggtgtctgtggaggggacatatcaaacagatgtggaagcagag
agggggccagcaaagctgcctgtggtgcctctagaggaaggccagcctcctctggatgag
gactgtgagacagatgtagaggagggcatgtccttagcagcctcggcagcaacagatata
agaaagagccggcttccagcagaaggggatgctgggacagagcgggctgcagctgttctt
gagagggagagagctcttgaggtgggggtccagggtgggtcacctgtggcacaagtggag
caggaccttctccctatctcagtggagaatctcacagatcctgtggtggacacaggcact
ccagaggaacccaggcagccacagagagagggagcccagacccctgcaggaagagagaga
gaaccacatgtgggcatgaccaaggactctgaagacaaccaagatgattctgaagatctg
gccctacaggctacccagtgctttgtggagagagagactgagagcctggaagcagtccag
agcatggaggatgaacccacccaggccttcctgattactctccccccagagcctggccct
tcccattgcagcttccaggccccaggtgccctagatgagccatgggaggtcctggctaca
cagccattctgcctgagagagtctgaggcctctgagacccagcctattgccacctacctc
aaggcccatggatcttgcctgtctccacctagggcaacatcacaagaccatcatccagag
agcccggttcacacagagccactggggattcaaggcaaagggatgcagactgtggataaa
ggcatgggtataccaaaagaaatagctgagagagggacccctgagaaaggaccattggag
agggaaaccaagaaactgcatccaaggggagagagagatgtggtgggaacggaagaatta
accagggagatacaggacagagaacaaaaacagctgttagctagagacactcagagacaa
gagtctgacaaaaaggtgaaaagtacaagtcctgaaatggatggggacagtttgaaggta
gaagttgagtcatccaaggaaatgcagcagaaagaaatagagaagcagacccttataaga
ggaatatttgagaaagtagagagcccagtaccagagggagagtgtgagccagctgggctg
gaagtgaggggccccacagtgatgctgaacagaggcacacagagagggggcccagaaggc
gggaaccaggaccagaaagggcaggcctcctgcccaacaccagagcctggagtggggata
gggcaccttcaggcacctgcttcagccccggtagcttctgggaggcagtcaagtggagaa
aggggagcccaagtgaaccccaagaggcagcagagaggtcaactgaattgcaagacgcca
cctgctgagaaggcttccagggaaaatcaagaatccccagatgcttgtctgcctcctaca
gtgcctgaagcctcaaccccaccccaagaccctcttctctcccagagccaaagccatgtt
gcacctcagtcccttctttctgccttcctaccttctcttgagccatccattcctaaaacc
aggcaaaacaggagtcaggaagcttcagagactccctcgtcctcagagctggaacatttc
caccgaaagcctaaagtcagaccccaggggtcttccaggatgacaccctctccagtttcc
tctactgcccatgagccccaccctaccacccccacagcccagcctgtcacccccgagccc
acatctcgcaccactcggggcaggacaaataggtcctctctcaagacacctgacccaatt
gtctttatagctcctgagctccagcctcccacttccacagcccagcctgtcaccccaaaa
cccacatctcgagccactcggggcaggacaaataggtcctctgtcaagacccctgactca
gttgtccccacagcccttgagcttcagccttccacctccacagcccagcctgtcaccccc
gagcccacatctcgggccactcggggcaggacaaataggtcctctgtcaagacccctgac
ccaattgtccccacaacccctgagctccagccttctagctccacagtccaacctgtcacc
ccaaagcccacatcttgggccactaggggcagaacaaatacatcctctgttaagggtccc
gaaccagttgtccccacagcccctgagctacagccttccacttccatagaccagcccgtc
accccaaagcgcacatctcgggccactcggggcaggacaaataggtcctctgtcaagacc
cctgacccaattgtccccacaacccctgagctccagccttctgcctccacagcccagcct
gtcaccccaaagcccacatcttgggccactaagggcaggactcataggtcctctgtcaag
acttccaaactagttgaacccacaacctctgatcttgagcttcccactcccacagaccaa
catgtcacccccgaggccatagttcagggtggtcagagcaagacactaaggtcttccaca
ataagtgttgtgccagttcctaccacccctgaattccagtctcctgtcaccacagaccag
cctgtttcccctgagccgattcctcaagccagttgcagcaggagacagagagctgctggg
aagcatggttccctctcagctcccattgtccacaagacttgctctgcatcgcctgaacct
aaatccccatcctcaaggaaccaaaaacagggagcagtgagagcagctgagtcccttaca
accattcctgagcctgcctttccccagctgctcgaggcatcccagatcgaaaaggtggaa
gcagcagatagatctgggttcaccccagagccccagcctaaggcctctcaaagccgcaag
aggcctttagctaccgtggattcacctccacttccaaaacggtcccaaagaggggaagtc
tcccagaagaccgcgttcctcaaggaagaggaagatactgcagagaggccaggaaaagag
gtgagaagagggctggggccacaaagctgggaaaaagggctcagaaattcccaccaagat
ctttctcaattccaggatgtagtgattccagcaccaggcaagagaaagagggaccaggta
gaggaggagcccaagggaatatcaagccgcagtctccgacggactaaacctaaccaagaa
tcgccagtccccaaagtgctcttcacaggagtggtggatgctcgaggagaacgggcagtg
ctggcactggggggaagtctggccagctcagtggcagaggcttcccacctggtcactgat
cgaatccgccggacagtcaagttcctgtgtgccctggggcgggggatccccatcctctcg
ctggactggctgcatcagtcccgcaaggctggttgcttcttgcccccggatgaatatgtg
gtgatcgatcctgaacaggagaagaactttggcttcagccttcgagatgctctgagccgg
gctcgggaacgaaggctgctggagggctatgagattcatgtgacccctggagtccagcca
cccccacctcagatgggagagatcatcagctgctgtggaggcactgtcctccccaacatg
ccccggtcctataagcctcggagaattgtgatcacatgcccccaggacttccctcgatgc
tccattccgttgcgagttgggctgcccctcctctcacctgagttcctgctgacaggtgtg
ctgaagcaggaagccaagccgcaggcctttgtcctctctactttggaaatgtcatccacc
tga

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