Propithecus coquereli (Coquerel's sifaka): 105820423
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Entry
105820423 CDS
T08746
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105820423 (HELZ)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105820423 (HELZ)
3'-5' decay
Other 3'-5' decay factors
105820423 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_5
AAA_16
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105820423
NCBI-ProteinID:
XP_012512351
Ensembl:
ENSPCOG00000016213
LinkDB
All DBs
Position
Unknown
AA seq
1930 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSIADFAGPCPLEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDDAFRTVLYCMQLKGKLQPVSTILAKSLT
GESLVSFGKLQTATCNVLSGYHVEDLDEGSCNGWHFRPPPRGITSSEEYTLCKRFLEQGI
CRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLIEKWMNSLSPEKV
LSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLYDAHRPHFSIIAI
SAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGTFRQTIVFDFGLE
PVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETTDLEKSLLIRY
QIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNLKVQLQILASFML
TGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVPKEKLVQTQGTKE
KVYEATIEEKTKEYIFLRISRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIKD
NGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGT
GKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNR
WVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHIL
LDEAAQAMECETIMPLALAAKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY
PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTARGEDVQE
KNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRL
SDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYK
LLNTAITRAQSLVAVVGDPIALCSVGRCRKFWERFIALCHENNSLHGITFEQIKAQLEAL
ELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQNDHFQSDGIVQPNPS
VLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVVMSVPLPVP
WTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVSIGQPQNPHQEKD
QHEQNRNGKSDTNNPGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPGVIYPNTKFP
RKDNLNPRHVTLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPN
QMPPQPNQVVQQQNQLSQQPPQPPPQLSPAYQAGPNSAFFNNAVSHRPQSPAAEAVIPEQ
QPPPMLQEGHSPLRAIAQPGPILPSHLNNFIDENPPGLPIGEALDRIHGSAALESLRQQR
ARLQQWDEHHACLSQGGIPYPHQHHPHLQRLPRPPLGLHQPPVRADWKLTSSAEDEAETT
YSRFQDLLRELSHRDQSETRELAEMPPPQSRLLQYRQVQTRSPPAVPSPPSGTDHSSHFS
NFNDNSRDIEVANNQAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNH
LMGPGFPYGLPPLPHRPPQNPFVQLQNHQQAIGQEPFHPLSSRTVSSSSLPSLEEYEPRG
PGRPLYQRRISSSSVQPCSEEVSAPQESLAQCKELQDHSSQSSFNFSSPESWVNTTSSTP
YQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYNVLQHLGQFPPLMPN
KQIAESANSSSPQISGGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQELSLGSSS
GSNGFYSYFK
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgtacagaggcccttctttctctaggccagtactcc
atagcagactttgcggggccttgtccattggagatagaacgcatcaaaattgagagtctt
ctttacagaattgcctcattcttgcaactgaaaaactatgggcaagctgatgaagattgt
agacatgtgctgggagaaggactggccaagggagatgacgcctttcgaaccgtgctctac
tgcatgcagctgaaaggaaagctccaacctgtatccaccattcttgccaagtcactgacc
ggagagtccctggtatcatttggaaaattgcagacagcaacttgtaatgtcctctctgga
tatcatgtggaagacttagatgaggggtcttgtaacggttggcatttccgcccaccacct
aggggaatcacaagcagcgaggaatatactttgtgtaaaagatttttagagcaaggaatc
tgtaggtatggtgcccagtgtacttcagcacattcccaggaagaactagcagaatggcag
aaaagatatgcttcacgactgataaaattgaaacagcaaaatgagaataaacagctctca
ggcagttacatggaaaccctgatagaaaaatggatgaattcattatctcctgagaaagtg
cttagtgaatgtatagaaggagtaaaggtagaacataatcctgacctgtcggttactgtc
aacaccaaaaaatctcaccagacatggacctttgctctcacttgtaagcctgcaagaatg
ctgtatcgtgtagcattgctttatgatgctcatcgtcctcattttagtatcattgcaata
tctgccggagatagtactacccaggtatcacaagaagtcccagaaaactgtcaagaatgg
ataggaggaaagatggcccaaaatggattagatcattacgtgtataaagtcgggatagca
tttaacacagaaatatttggaacttttcgccaaaccatagttttcgactttggattggag
ccagtactcatgcaaagagtaatgattgatgcagcttctacagaagatctcgaatacctg
atgcatgcaaaacaacagctagtaaccacagctaagcgttgggattcttcatctaagact
attatagattttgaacctaatgaaactactgatttggagaagagccttcttatcagatac
caaattcctctctctgctgaccagctgtttactcagtccgttttagacaaatcattgacc
aagaccaactatcagtcacggttgcatgaccttctttatattgaggagatagcccagtat
aaagaagtcagcaagttcaaccttaaagtgcaattgcagattctagcaagcttcatgctg
actggagtttctggaggtgcaaagtatgctcagaatggacaactttttggtcgctttaag
cttactgaaacactttctgaagatactttggctggacgactggtgatgaccaaagtcaat
gctgtttatttattaccagtccctaaagagaagttagtacagacccagggaaccaaagag
aaggtttatgaagctactattgaagaaaaaacaaaagaatatatatttttaaggatatcc
agggaatgctgtgaagaacttaatcttcggcctgattgtgacacacaggttgaacttcag
tttcaattaaatcggttacccctctgtgaaatgcattatgcactagacagaatcaaggac
aatggggttttgtttccagacatcagtatgactcccaccataccctggagtcccaacagg
caatgggatgaacaattggatcctcgactaaatgcgaagcagaaagaggctgttctggcc
ataaccactccactttcaatacagctgccgcctgtgcttatcatcggaccctatggaaca
ggcaaaacattcacactagctcaggccgtcaaacatattctgcagcagcaggagactagg
attctcatttgcacccattctaatagtgctgctgatctctacataaaggattatttacat
ccatatgtagaagcaggcaatccccaggcaagacctctcagggtatatttcagaaatcgc
tgggtaaagactgtccacccagttgtgcatcagtactgtttgatctcaagtgcacattcc
acctttcagatgccacagaaagaagatattcttaaacatcgagtggttgttgttacattg
aatacttcccagtacctctgtcaattggaccttgaacctgggttttttacccacattcta
ttagatgaagctgcccaggccatggagtgtgaaaccattatgcctctagcattagcagct
aaaaacactcggattgtcttggctggtgatcacatgcagctcagtccttttgtttacagc
gagtttgccagggagagaaaccttcatgtttcattacttgataggctctatgagcattac
cctgccgagtttccatgtaggatcctcttatgtgagaactaccgctcccatgaagctatc
atcaattacacctctgagcttttctatgagggcaaactgatggccagtggaaagcaacca
gcacacaaggatttctacccactaactttctttacagcacgaggggaagatgtacaagaa
aaaaatagcacagctttttataataatgcagaggtattcgaagtggtggagcgtgtagaa
gaattaagaaggaagtggccagtagcatgggggaagttagatgatggcagtattggtgtg
gtgactccatatgctgatcaagtgtttaggatacgtgctgaacttcgaaaaaagcggtta
tctgatgttaatgtagaaagggtgctaaatgttcaaggaaagcagttcagagttttgttt
cttagcacagtacgtacaagacatacttgtaaacataaacagacaccaattaaaaagaaa
gaacaacttctggaagattccacagaggacttagattatggttttttgtctaattacaag
cttctcaatactgccatcacaagagcacagtcgctggttgctgtggtgggtgaccccatt
gctctgtgctctgttggaagatgcaggaaattttgggagcggtttattgccctatgtcat
gaaaataatagcctacatggaatcacttttgaacagatcaaggcccagttagaggcttta
gaactaaagaagacctatgtgttgaatcctctggcgcctgaatttatccctcgggctcta
agactgcagcattcaggaagtaccaacaaacagcagcaatcaccaccaaaggggaaaagc
ctccatcatactcagaatgatcattttcagagtgatggaattgttcagcccaatccttcc
gtacttattggcaatcctattagagcatatactcctccaccccctcttggacctcaccca
aatttgggaaaatctccaagccccgttcaaagaatagatcctcacactgggacaagtatt
ctttatgtacctgctgtctatggagggaatgtagttatgtcggtgcctttacctgtacca
tggacaggataccagggtaggtttgcagttgatcctcgaattattacacatcaggcagcg
atggcctataatatgaacctattacaaacacatggacggggatctcctataccttatggc
cttggacatcatccgcctgtcagcatagggcagccacaaaatccgcatcaggagaaggat
caacatgaacaaaatcgaaatggtaaaagtgatacaaataatcctggacctgaaattaat
aagattagaacaccagagaaaaagcctacagaaccaaaacaggttgatttggaatcaaat
ccacagaacagaagtcctgaatcacgtcctggtgttatttatcccaataccaaatttcct
cgcaaagataatctcaacccaagacacgtaactcttccgcttcctgctccccatgcacag
tatgcaatccctaatcgccatttccaccccctcccccagctaccaagaccaccgttccca
attccgcagcagcacaccttgttaaatcagcagcagaataatttgcctgagcaaccaaat
caaatgccacctcaaccaaatcaggtagtccagcagcagaaccagctgagccagcagcct
ccgcagccgccacctcagctttcccctgcatatcaggcaggacccaacagcgcttttttt
aataatgcagtttctcatcgaccacagtctcctgctgcagaggctgtgattcctgagcag
cagccccctcccatgctgcaagaaggccacagccctctgagagccattgcacagcccggc
cccattcttccttcacatctgaataacttcatcgatgagaacccaccgggattacctata
ggagaggctttagatcgtatccatgggagtgcagctctggaatcgctaaggcagcagcga
gcacggttgcagcagtgggacgagcatcacgcctgcctcagtcagggcggtattccgtac
ccgcaccagcaccacccccacctccagcgtcttcctcggccacccctagggctacatcag
ccacccgtgagggcagactggaagctcaccagcagtgccgaagacgaagcagaaacaaca
tattcaaggtttcaagacttactcagagaactgtctcatcgtgatcaaagtgaaacacgg
gaactagctgaaatgccaccacctcaatcaagacttttgcaatacagacaagtgcagact
aggagcccaccagcagtcccgtctcccccatccggtacagaccacagtagccacttttct
aactttaatgacaacagcagagacattgaagtagccaacaaccaagcatttccgcagcgc
ctcccaccccagatattcagctctcctttctcgttgccatctgaacaccttgcccctcct
cccctgaaatacctggcacctgatggagcatggacttttgctaacttgcaacagaatcac
ctaatggggcctggctttccctatggcctacctccattgcctcacaggccaccacaaaac
ccttttgtacaattacagaatcatcaacaggctattggtcaagagccatttcacccattg
tcatctcgaacagtatcttcttcttcgctccctagcttagaagagtatgagcccagggga
cctggtcggcccttgtaccaaagaagaatctcatctagctcagttcagccttgttctgaa
gaagtaagcgctcctcaggagagtctggcccagtgtaaggagcttcaggaccacagtagc
caatcttctttcaacttctcatccccggagtcctgggtaaacaccacctcatctactccc
taccagaacattccgtgcaatggatccagcaggacagctcaacccagagaattgatagct
ccacccaagaccgtcaaaccccctgaggatcagctgaagtcggaaaacctcgaggtgtcc
agttccttcaactacaatgtgctgcagcatctcggccagttcccacccctcatgcccaac
aagcagatcgcggagtcggccaatagcagcagcccccagatctctggtgggggcaagcct
gccatgtcctatgccagtgctctgagggcccctcccaagcccagacccccccctgagcag
gccaagaagagtagcgaccctctgtctctgttccaggaacttagccttgggagctcgtcg
ggcagcaatggcttttactcctattttaaataa
DBGET
integrated database retrieval system
