Poriferisphaera corsica: KS4_05590
Help
Entry
KS4_05590 CDS
T06996
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS4_05590 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcor03019
]
KS4_05590 (rhlE)
Enzymes [BR:
pcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KS4_05590 (rhlE)
Messenger RNA biogenesis [BR:
pcor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KS4_05590 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDU32527
UniProt:
A0A517YQM4
LinkDB
All DBs
Position
674375..675970
Genome browser
AA seq
531 aa
AA seq
DB search
MRFEEMGLIEPLMRAVSKKGYETPTEIQREVFSDVMAGKDVLGIAQTGTGKTAAFALPIL
QKLYKTKPKVKLKEGKKPGKRGGGRRRDVRDDRAIRGLVMVPTRELAEQVSESFQAYGQY
TGLRRAVVYGGVKQGRQVMALERGVDILVATPGRMFDLMEQGYVNLDKVEICVLDEADRM
LDMGFLPDIRALEKALPKGAQHCMFSATLPRSIRGLADSILNDPEFIEIEPETIAAETVH
QVLYEVERKDKPALLRQLLSEEHLKRVLVFCRTKRNADKLVQRLAKFHFTAESIHSDRSQ
GARQRALDGFKNGDVDVLIATDIAARGIDVSDISHVVNYDLPEDPETYIHRIGRTGRAGA
SGDAISFVSHDDGKALRLIERLLGWHIPIKQHSFENEDLAEILARGGKKKTELKKKKVKT
RPGVGRVSGGNAAAPKGKTKSKKKASRKAVSDKKQTKRTITKKATKKKVAKKGDSFKKGG
LKKKAAKKKTAKKVGAKGKGGAKRSSKGVRKKASRAGAMKQRTGGGVKRKG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttgaagagatgggactaattgagccgctgatgagggcagtgagcaagaagggg
tacgagacgccgacagagattcagcgtgaggtgtttagtgatgtgatggcaggtaaggat
gtgctggggattgcgcagacgggtacggggaagacggcggcgtttgcgttgccgatcttg
cagaagctatataagacgaagccaaaggtgaagttgaaggaagggaagaagccggggaaa
cgtggtgggggccgaagacgggatgtgcgggatgatcgtgcgattcgtgggttggtgatg
gtgccgacacgcgagttggcggagcaggtgagtgagagtttccaggcgtatgggcaatat
acggggttgcgccgggcggtggtttatggtggtgtgaagcagggccggcaggtgatggcg
ctggaacgcggggtggatattctggtggcaacgccggggcgtatgtttgatttgatggag
caggggtatgtgaatctggacaaggtcgagatttgtgtgttggatgaggcggatcggatg
ctggacatggggttcttgccggacatccgcgcattggaaaaagcgttgccgaaaggtgcg
cagcattgcatgttctcggcgacattaccacgatctattcgcgggttagctgattcaata
ttgaatgatccggagtttattgagattgagccagagacgattgcggcggagacggtgcat
caggttttgtatgaagttgagcgtaaggacaagccggcgttgctgaggcagttgctgagt
gaagagcatttgaagcgcgtgcttgtgttctgtagaacgaagcgtaatgcggacaagctg
gtgcagcggcttgcgaagtttcactttacggcggaatcgattcactcggatcggtcacag
ggtgcgcggcaaagagcgcttgacgggtttaagaatggtgatgttgatgttttgattgcg
acggatattgcggcgcgtgggattgatgtgtcggatatttcgcatgtggtgaattatgat
ttgccggaggatcctgagacgtatattcaccggattggcagaacgggtcgtgcgggtgcg
agtggagatgcgatttcgtttgtgagccatgatgatgggaaggcactacggctgattgag
cgtttgttgggttggcatatcccgattaaacagcatagttttgagaatgaagatttagct
gagattttggcgcgtggtggtaagaagaagactgagttgaagaagaagaaggtgaagacg
cggccgggcgttggtcgtgtgagtggtgggaatgcggcggcgccgaagggcaagacgaag
agtaagaaaaaagcgagtcgtaaggcggtttctgataagaagcagacaaagcgaacgatt
acgaaaaaggcaaccaagaagaaagttgcgaagaagggcgactcctttaagaagggcggt
ttgaagaagaaggctgctaagaagaaaactgctaagaaggttggcgcgaagggtaaaggc
ggtgcgaagcggagcagtaagggtgttcgaaagaaggcatcacgtgctggcgcgatgaag
cagcgaaccgggggcggtgtgaagcgtaaagggtag
DBGET
integrated database retrieval system
