Pseudomonas chlororaphis subsp. aurantiaca: JM49_07540
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Entry
JM49_07540 CDS
T03338
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_3_5
Cadherin_5
PUA
Big_9
PKD
Gp34_C
PPC
Motif
Other DBs
NCBI-ProteinID:
AIS11544
LinkDB
All DBs
Position
1607478..1615379
Genome browser
AA seq
2633 aa
AA seq
DB search
MKSGEQIVLKNFFIASADGQRNELVLEDKGKFWHAAYGENEAAFSLNEISSLDELLVAEG
GDNTFMWLIGALGLGGVVALASGGGGGGGGGGGGGGGTSATKPPVPVIRFDAQTNKLVIE
GRPGATFEVKGGNGQTLATGTLGNDGRAQVQIPPVASDQNITVTQTVDGVQSEPSSALTL
PLMKPELGQIDPSKGELPVTGKPGSSVQLVDKDGKPIGPAVTLDEKGEGVIKLPVNVSGE
QVGVVVQNGGQQSPVSTVEVPLLPPHLGQIDPAKGELPVTGKPGSSVQLVDKDGKPIGPA
VTLDEKGEGVIKLPVNVSGEQVGVVVQNGGQQSPVSTVEVPLLPPHLGQIDPAKGELPVT
GKPGSSVQLVDKDGKPIGPAVTLDEKGEGVIKLPVNVSGEQVGVVVQNGGQQSPVSTVEV
PLLPPHLGQIDPAKGELPVTGKPGSSVQLVDKDGKPIGPAVTLDEKGEGVIKLPVNVSGE
QVGVVVQNGGQQSPVSTVEVPLLPPHLGKIDPAKGELPVTGKPGSSVQLQDKDGKPVGSP
VLLDAQGQGMIKLPQNASGESLQAIQVAKNIQSPASDAVVVPPLKPVVGTVDPQTGKVTV
AGKPGATVQLKDNTGKVVGEPMTLDAQGKGEIQVPTTLSEQLVTVTQSVGGVESLPSTGI
DVPLLKPSLGVPDAAKGEVAVSGKPGASVQLQDKDGKPVGTPVTLDAQGQGVIKLPQSAS
GESLQAVQSSGDKTSPASDALTVPALKPTVSAVDPQTGKVTIEGKPGATVQLNDSAGKNV
GIPVTLDAQGKGELQVPTTLSEQLVTVTQSVGGVESLPSTGIDVPLLKPSLGVPDAAKGE
VAVSGKPGASVQLQDKDGKPVGTPVTLDAQGQGVIKLPQSASGESLQAVQSSGDKTSPAS
DALTVPALKPTVSAVDPQTGKVTIEGKPGATVQLNDSAGKNVGIPVTLDAQGKGELQVPT
TLSDQQVTVTQTVGSVESLPSSVVDVPLLKPSMGVPDAAKGEVTVSGKPGASVQLQSQDG
QPVGAPVILDTLGQGVVKLPQSAGGENLQAVQRSDGKTSPASEAVAAPMQTPVLGTVDAQ
NNQLSVEGKPGATVQLKDAAGNTVGAPVTLDAQGKGVISLAPQLSGQDLTVTQAAKGVES
APSTTTVPMLTPVLGPIDVETRQVTVEGKPGATFQILNETTGRVYREGTFDAEGKALVTL
PANASGQRITATQADPAVVGLVLSRSSSDEQILAAVEKQRAEKASKSSPGVEVPLFKPDL
TLDESANVLSVEGMPNATVEIKNSAGVVIASLQLDGDGLGSVALSHALRGESVSAVIRDG
ARESAAAQTVIPLLKVVLAAVDVQNSTVVAEGKPGASVQLQDKDGKPVGAPVNLDTQGKA
VLSIPAGLSGEKLQAIQTFNGVKSPVSDAFVVPLLKPVLGVLDADKGELPVTGKPGATVQ
LKNSTGQDVGTPVILDAQGKGALQVPPTLSGQVVTVVQKFSGLQSPPSDGASIPLLKPTL
AFDAHSGELSVTGKPNASVQLLDKNNNPVGSPVQLDAQGQAVIKLPHSLGGESVGVIAQE
AGGTSALSTLKVPLLAPVFGEVDALSGQVSVEGKPEGIVRIENPDGTFIRVPLDENGKGS
VILPSGVSSENLEAAVRLGNLESVPGALAVPVLAPRGAAINDTGSTVTVKAKPGEIIKVK
DVSGKELGSGVVGKDGSVEIALNTPQKTGAPLSVTAHNQGEISPTVTVVTPFIDASLPLP
PTELSINPAGTRVLGKAKPGETIKIVNLDTEEDLGTFPVAIDGFFSADIPAQKSGSKLAI
TAIKGEKSSEPALLLIPLSGDETPAKPYDVVVDVTGTKVQGKGTPNTIVLIKAEDNKTVI
AKGIVGANGTFEVTIAPQPGGTLLSVALQNKDKVSESEEVVTPHIVSNTPTDVRLDESGT
QVTGKGNKGDVIRVENAQGKEIGSGVVKPDGTFVVTIPKQPADTTLAVTAQGNGAESAPA
FVKIPATEVERPPQPEAHLNATGTLITGKTQPGANVSVKDATGKLLAGPVQANADGTFEA
TIARQPAGSKVAVVAEVAGKESLPNELIAPQVAGGAPPAPVSALISADGKLVSGKAAPNT
KVVVKDASGNSLGEQLVDADGNYVVSIKAQMGGATLGVTSTSLDGKLVSPSVSVLAPFQL
VAEHHEATVSQFIDPNFNQVENKEQARFITPASSGVNAGLNFLSNLVGAGDVLPTSKTYH
FSVSKSEKVEITVSSSSPINIDLVNFNGVKLEKLVDGKWVEVRGSNGGGLGNLSVVPIIA
TNSGIQLKYETPGEYRVTVNNFDLLGVGYKTYDTNIVKTSFVGGVANSAISSNLVLPANA
KLLKVNETTLANEVLTIVKGKYGQLSIGTDGQARYQQDHNATPSDQTETFSYEARAADGS
ILKSTFNISIKAYSVSGDAVTNEEASIASINGKSLSAANQEIIVGKFGDLKIKANGEYTY
TPKLSLTGLNETEKFTYQVKHKNGETVTSTLEVKIADSKLVAELDKVATGSTVTGPDLAT
AETAPESLAGTEVADQAELPQFNLAQGQKLDTSKLVSLQSKDDASKAPLTVTLNDILQSD
GSLSKPVSVSALDLPDSWKPDGLKGSLNGHEYLHYIDETTKKDLWVESGVSVV
NT seq
7902 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtccggtgagcaaatagtgctcaagaattttttcattgcgtcggccgatggccag
cgtaatgaactggtgctggaagacaagggcaagttctggcacgccgcttatggcgaaaat
gaagccgcattttccctgaatgaaatctccagtctggatgagttgctggtggcagagggt
ggcgataacaccttcatgtggctgatcggagcgctcggactcgggggcgtggtggcgctg
gcgagtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtaccagcgca
accaaaccacccgttcccgtcatccggttcgacgcccagaccaacaagctggttatcgag
gggcgccctggcgcgacattcgaggtcaagggcggcaatggccagactcttgccacgggc
accctgggcaatgacgggcgcgcacaagtgcagatcccgccggtggccagcgatcagaat
attacagtgacccagaccgtggatggcgttcagtccgagccgtcctcggccctcaccttg
cccctgatgaaaccggagctgggccagatcgacccgagcaagggtgaactgccggtcacc
ggtaaaccaggttcaagcgtgcagttggtggataaggacggcaaaccgattggccctgct
gtgacgctcgacgagaagggcgagggcgttatcaagctgccagtgaatgtcagcggcgaa
caggtgggtgtggtggttcagaacggcggccagcagtcgccggtttctactgtcgaggtg
ccgttattgccgccgcatttgggccagatcgatccggccaagggtgaactgccggttacc
ggtaaaccaggttcgagcgtgcagttggtggataaggacggcaaaccgattggccccgct
gtgacgctcgacgagaagggcgagggcgttatcaagctgccagtgaatgtcagcggcgaa
caggtgggtgtggtggttcagaacggcggccagcagtcgccggtttctactgtcgaggtg
ccgttattgccgccgcatttgggccagatcgatccggccaagggtgaactgccggtcacc
ggtaaaccaggttcaagcgtgcagttggtggataaggacggcaaaccgattggccctgct
gtgacgctcgacgagaagggcgagggcgttatcaagctgccagtgaatgtcagcggcgaa
caggtgggtgtggtggttcagaacggcggccagcagtcgccggtttctactgtcgaggtg
ccgttattgccgccgcatttgggccagatcgatccggccaagggtgaactgccggttacc
ggtaaaccaggttcgagcgtgcagttggtggataaggacggcaaaccgattggccccgct
gtgacgctcgacgagaagggcgagggcgttatcaagctgccagtgaatgtcagcggcgaa
caggtgggtgtggtggttcagaacggcggccagcagtcgccggtttctactgtcgaggtg
ccgttgttgccaccgcatttgggcaagatcgatccggccaagggtgaactgccggttacc
ggtaaaccaggttcgagtgtgcagttgcaggacaaggacggtaagccggtcggttcgccc
gtgctcctcgatgcccagggacaaggcatgatcaagctgccacaaaacgccagcggcgag
agccttcaggcgatccaggttgccaagaatatccagtcgccagccagtgatgcggtggtg
gtgccaccgctgaaaccggtggtgggcacggtcgatccacaaaccggcaaggtgacggtt
gcaggcaagccgggcgcgaccgtgcagttgaaagacaacacgggcaaggttgtgggtgag
cctatgactctggatgcccagggcaagggggagatccaggtcccaacgaccttgagcgag
cagctggtcacggtcacccagagcgtgggtggcgtcgagtcgttgccttccaccgggatc
gatgtaccgctgctgaaaccctcgttaggcgtaccggatgcagccaaaggtgaagtggct
gtcagcggcaaaccgggtgccagcgtgcagttgcaagacaaggatggtaagccggtcggt
actcctgtgaccctggatgcccagggccagggcgtgatcaagttgccccagagcgccagt
ggtgaaagcctgcaggcggtgcagagctcaggtgacaagacctcgccagccagtgatgcc
ttaacggttccagcactgaaacccaccgtgagcgcggtcgatccgcaaaccggcaaggta
acgatcgagggcaagccgggcgctaccgtgcagttgaacgacagcgcgggcaagaatgtg
ggcatccccgtgaccctggatgcccagggcaagggcgagctgcaggttccaacgaccttg
agcgagcagctggtcacggtcacccagagcgtgggtggcgtcgagtcgttgccttccacc
gggatcgatgtaccgctgctgaaaccctcgttaggcgtaccggatgcagccaaaggtgaa
gtggctgtcagcggcaaaccgggtgccagcgtgcagttgcaagacaaggatggtaagccg
gtcggtactcctgtgaccctggatgcccagggccagggcgtgatcaagttgccccagagc
gccagtggtgaaagcctgcaggcggtgcagagctcaggtgacaagacctcgccagccagt
gatgccttaacggttccagcactgaaacccaccgtgagcgcggtcgatccgcaaaccggc
aaggtaacgatcgagggcaagccgggcgctaccgtgcagttgaacgacagcgcgggcaag
aatgtgggcatccccgtgaccctggatgcccagggcaagggcgagctgcaggtaccaacg
accctgagcgaccagcaagtcacggtcacccagaccgtgggcagcgtcgagtcgttgcct
tcctccgtggttgacgtaccgctgttgaaaccgtcgatgggggtaccggatgccgctaaa
ggtgaagtgacggtcagtggcaagccgggtgccagcgtccagttgcagagccaggatggc
cagccggttggcgcgccagtgatcctcgatactctgggccagggtgtggtcaagctgccg
cagagcgccgggggcgaaaacctacaggcggtgcagcgctcggatggcaagacgtcgccc
gccagcgaggcggtagcggccccgatgcagacgccggtcctgggcactgtggatgcgcag
aacaaccagctgagtgtcgagggcaagccgggggcgaccgtacagttgaaagacgctgcg
ggcaatacggtgggcgcccctgtgaccctcgatgcccaaggtaaaggcgtgatctcgctg
gcgccgcaattgagcggccaggacctgacggtcacgcaagcggccaagggggtcgagtct
gctccgtctaccacgactgtcccgatgctgacccctgtgctggggccgatcgatgtggag
acacgacaagttaccgtcgaaggtaaacccggggcgacgttccagattctgaacgagacc
accggcagggtttaccgcgaaggcacctttgacgcggaaggcaaggcgctggtgacgttg
cccgccaatgccagcggacagagaatcaccgccacccaggccgatcctgccgtagtcggc
ttggtgctttcacgcagttcttccgatgaacagatactggccgctgttgaaaagcaacgg
gccgagaaagcatcgaagtcgtctcccggggttgaagtaccgctattcaagccggatttg
accctggatgaaagtgcaaatgtattgagcgtagagggtatgccgaacgccacggtcgag
atcaagaactcggcgggtgtggtgattgccagccttcagctggatggcgacggcctgggt
agcgtcgcgctttcccatgcgctgcgtggcgagtccgtcagtgcggtgatcagggacggc
gcacgggaatccgcggcggcgcaaaccgttatccctctgctgaaagtcgtgttggctgcg
gtcgatgtgcaaaacagcacggttgtggccgaaggcaagccgggcgctagcgtccagttg
caggataaggacggtaagccggtcggtgcccctgtgaacctggatacccagggtaaggcg
gtgctttcgataccggccggcctgagcggagaaaaactccaggccattcaaaccttcaac
ggcgtcaagtcaccggtcagcgatgcctttgtggtgccgctgttgaagccggtgttgggt
gtgctcgatgccgacaagggcgagctgccggtcactggcaaaccgggcgcaactgtgcag
ttgaagaacagcacgggccaggacgtgggcactcctgtgatcctggatgctcagggcaag
ggggcgttgcaggtgcctccgacgttgagtgggcaggtggtaaccgtggtacagaaattc
agtggcctacaatcgcctccttccgatggcgcgagtattccgttgctcaagccaaccttg
gcatttgatgcgcacagcggtgagttgtcggtcaccggcaagccgaacgccagtgttcag
ttgctggacaaaaacaacaacccggtaggctcgccggtacagctggatgcacaaggtcag
gccgtgatcaagctgccccatagtcttggaggtgagtcagttggtgtgattgctcaggag
gcaggtggtacgtcggcactctcgacgctcaaggtgccattgttggcgccggtgtttggt
gaggtcgatgcgctcagtgggcaggtgagcgtagaaggtaaacccgaaggcatcgtgcgg
attgagaacccggacggcacgttcattcgtgtgccactggatgaaaatggcaagggcagt
gtcattctgccttctggcgtgagcagtgaaaacctggaagcggctgtcagactgggcaac
ctggagtctgttcccggtgcgttggctgtgccggtgctggccccacgtggagccgcgatc
aatgacacaggcagcacggtgacagtcaaggccaaaccaggcgagatcatcaaggtcaag
gatgtcagcggcaaggagttgggcagcggcgtcgtgggcaaggatggctcggtcgagatt
gccctgaacactcctcagaagaccggtgcacccttgagcgtgacggcgcacaaccagggt
gaaatttcaccgacggttacggtggtgacgccgtttatcgacgcgagcctgccgttgccg
ccgaccgagttgagcatcaacccggccggtacccgagtgctgggcaaggctaaaccgggc
gagaccatcaagatcgtcaatctggataccgaggaagacttgggaacgttcccagtggcg
attgacggcttcttctcggccgacattccggcgcagaaaagcggcagcaagcttgccatt
accgcgataaagggcgagaagtcctcggagccggccctgttgctgattcccctcagtggc
gatgagacaccagccaagccttacgatgtagtcgtcgatgttacggggaccaaggttcaa
ggcaagggcacgccgaacaccatcgttctgatcaaggctgaggacaacaagaccgttatt
gccaagggcatagtcggggcgaacggcactttcgaggtcacgattgctccgcagccgggt
ggtacgctgttgagcgttgcattgcagaacaaggacaaggtatccgagtccgaggaggtt
gtaacacctcacattgtctccaataccccgactgatgtgcgcctcgacgagtcgggcact
caagtgacgggcaagggcaataagggtgatgtcattcgcgtcgagaatgcgcagggtaag
gagatcggctctggagtggtcaagccggacggcaccttcgtggtcaccatcccgaaacag
ccagccgacacgaccttggccgtgacagctcaaggtaatggtgcagagtccgcgccggct
ttcgtgaaaataccggcgaccgaggtcgaacgaccgccgcagccggaggcccatctgaat
gccactggtaccctgatcacgggcaagacccaacccggcgcgaacgtctcggtcaaagat
gccaccggcaagctgttggcaggcccggtgcaggctaatgcggacggtacgttcgaggcg
accattgccaggcagcccgcgggcagcaaggtggcggtcgtggctgaagtggcgggcaaa
gagtcgttgcccaacgaactgatcgcgccacaggtggcgggaggagcccctccggcgcca
gtgagtgcactgatcagtgccgatggcaagttagtctcgggcaaggccgcgcccaacacc
aaagtcgtggtcaaggatgccagtggtaattcgctgggtgagcaactggtcgatgccgat
ggcaactatgtcgtgtcgatcaaggcacaaatgggcggggcaaccttgggggtaacctcg
acctctctggatggcaagttggtgtcaccttcagtgtcggtattggcgccgttccaattg
gtggcggagcatcatgaggcaacggtcagccagttcattgatccaaacttcaatcaggtg
gaaaacaaagagcaagctcgctttattacgcctgcatcctccggggtcaacgctggttta
aactttttgagtaatttggttggggcgggagacgttttgcctacctcgaagacctaccac
ttctctgtcagtaaaagtgaaaaggtagagattactgtcagcagttcgtccccgattaat
atcgacctggttaactttaatggagtgaagctggaaaaattggtcgatggcaagtgggtt
gaggtaaggggcagcaatgggggcggccttggtaacctgtcggttgtcccgattatcgcg
acgaattcaggtatccaacttaaatacgagacgcctggagagtaccgggtcactgtcaat
aattttgatctgctgggtgtgggctataaaacctatgacaccaatattgtcaaaacatca
tttgttggcggtgttgcaaacagtgctataagcagcaacctcgtactgccagcgaacgcg
aaattgttgaaggtcaatgagacgacgctggccaatgaagtgctcacgatcgtgaaagga
aagtatggccaactgtctattgggactgatggtcaagcacggtatcaacaggatcataat
gcgactccttcggaccagacggagacgttttcctatgaggccagggctgctgatggatct
atcctgaaatcaaccttcaacattagcatcaaggcctattccgtctcgggcgacgcggtg
accaacgaggaggccagcattgccagtatcaatggcaagtccttgtccgcggctaatcag
gaaatcatagtcggcaagttcggtgacctgaaaatcaaggccaacggtgagtacacctac
acgcctaaacttagcctgacgggcttgaacgaaacggaaaagttcacctatcaggtcaag
cacaagaatggtgagacggtgacctcgactcttgaggtgaaaatcgccgactccaagctt
gttgccgagctggacaaggtagcgacaggttcaacagtcaccgggcctgacctggcaacg
gcggaaacggcgcccgagagcctggctggaacggaggtcgcggaccaggcagagctgccg
cagttcaacctggcccaggggcaaaagctggacaccagcaagctggtcagtctgcaatcc
aaggatgatgcgtccaaggcaccgttgacggtgaccttgaacgatatcctgcagtctgac
ggttcgctgtccaagccggtctctgtttcggcactggacctgccggattcctggaagccc
gatggcctcaagggctccctgaatggacacgagtatttgcactatatcgatgaaacgacg
aaaaaagacctgtgggtcgaaagcggtgtttcggtcgtttaa
DBGET
integrated database retrieval system
