Pseudomonas chlororaphis subsp. aurantiaca: JM49_21715
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Entry
JM49_21715 CDS
T03338
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00020
Citrate cycle (TCA cycle)
pcp00190
Oxidative phosphorylation
pcp00650
Butanoate metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01200
Carbon metabolism
Module
pcp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JM49_21715 (sdhB)
00650 Butanoate metabolism
JM49_21715 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
JM49_21715 (sdhB)
Enzymes [BR:
pcp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JM49_21715 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4_2
Fer4_3
Fer4
Motif
Other DBs
NCBI-ProteinID:
AIS14173
UniProt:
A0A1E1FT69
LinkDB
All DBs
Position
complement(4753927..4754631)
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AA seq
234 aa
AA seq
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MLQVEVYRYNPDTDSAPKTQVFQVDTGGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKNNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLQSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcgaagtttatcgttacaaccctgacaccgactccgcgccgaaaacccag
gttttccaggtcgacaccggtggcaaggatctgatggtgctggacgtactggcgctgatc
aaagagcaggacgaaggtttctcctatcgtcgctcctgccgtgaaggcgtttgcggttcc
gacggcatgaacatcaacggcaagaacggcctggcgtgcatcacgccgctgtctgccgtg
gtgaagaacaacaagctggttgttcgtccgctgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggtgaagccattcctgcagaac
gacacgccggctccggccatcgaacgtctgcagtcccctgaagagcgcgaaaagctcgat
ggtctgtacgagtgcatcctgtgcgcttgctgctcgacttcctgcccgtccttctggtgg
aacccggacaagttcctgggtccagctgcactgctgcaagcctatcgcttcctggcagac
agccgcgacaccaagacgtccgagcgtctggcttcgctggatgatccgttcagcgtattc
cgctgccgcggcatcatgaactgcgtcaacgtttgtccgaaaggcctgaacccgactaag
gccatcggtcacatacgtaacatgctgctgcaaagcggcgtgtga
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