Pseudomonas chlororaphis subsp. aurantiaca: JM49_30475
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Entry
JM49_30475 CDS
T03338
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JM49_30475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_30475
Enzymes [BR:
pcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
JM49_30475
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JM49_30475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
AIS15859
LinkDB
All DBs
Position
complement(6684787..6685350)
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AA seq
187 aa
AA seq
DB search
MPRCFWCNEDPLYMAYHDQEWGVPLRDAQRLFELLLLEGFQAGLSWITVLKKRERYRQVL
FGFDVQRVAQMSDAEIDELMLDPGIIRNRLKLAAARRNAQAWMALEDPVAFLWSFVGGVP
RVNHFKDRSEVPAVTPEAEAMSKGLKKAGFTFVGPTICYALMQASGMVMDHTRDCDRYAI
LANGRLE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctgcttttggtgcaacgaagatcccctgtacatggcgtaccacgatcaggag
tggggcgtgccgctacgcgatgcgcagcgtttgttcgagttgttattgctcgaagggttc
caggccggcctgtcctggatcaccgtcctgaagaagcgcgagcgctatcgccaggtgctg
ttcggcttcgatgtgcagcgcgtggcgcagatgagtgacgcggaaatcgacgagctgatg
ctcgatcccgggatcatccgcaaccgcctgaaactcgctgccgcgcggcgcaatgcccag
gcctggatggcgctggaggacccggtggcattcctctggtcgttcgtcggcggggtgccc
agggtcaatcatttcaaggaccgcagcgaggtcccggcggtgactccagaggccgaggcg
atgagcaaggggctgaaaaaggccggcttcacctttgtcgggccgaccatctgttatgcg
ctgatgcaggcttcgggcatggtgatggatcacactcgggactgcgatcgctacgccatc
ctggcaaacgggcggttagaataa
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