Pelecanus crispus (Dalmatian pelican): 104038499
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Entry
104038499 CDS
T08340
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104038499 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcri03041
]
104038499 (DDX46)
Enzymes [BR:
pcri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104038499 (DDX46)
Spliceosome [BR:
pcri03041
]
Complex A
U2 snRNP components
U2 related factors
104038499 (DDX46)
Complex B
104038499 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104038499
NCBI-ProteinID:
XP_009491156
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
PGCWACREKGSVGPGLQEGEQGNYSGVVSENQESEEEEVVTVEVPLWLVHSAEEFPREFP
ALLSPTHRKGIDHSCVTYAQGFMFLRLQFDSFSIEQRHYRKRSASRGRSGSRSRSRSPSD
KRGKRGEDRRSRSRDRERRRERSRSRDKRRSRSRDRKRQRRSRSRERERSRERRRSRSRE
RRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEKTEGVEVSKEKKKDKEDKEEEKDKDATT
NTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDD
DDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTK
VVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDH
GKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGITVKGKGCPKPIKTWVQCGISMKI
LTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEG
EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP
GRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATF
PRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVI
IFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGICKLLVATSVAARGL
DVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGN
PIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQD
SDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPTPSAGNAEKLEIAKRLALRINAQK
NLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEK
QEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPP
GKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
cctggctgctgggcttgtcgggagaaagggtctgtgggtcctgggctacaggagggtgaa
caagggaactattctggcgtggtgagtgaaaatcaggagtcggaggaagaggaggtggtc
acagttgaggtccctctgtggcttgtacactcagctgaagagtttcctagagaattccca
gccctactctctcccacgcaccgtaaaggcattgaccattcctgtgtcacgtatgctcag
gggtttatgtttcttcgattgcagtttgacagcttttccattgagcagaggcattatcgg
aagcgctctgcgtcacgtggacgctctggtagccgttctagaagtcgttctccatctgac
aagagaggaaaacgtggagaagacagacgctctagaagcagagatcgagaacgtagacgt
gagaggtcacgcagtagggacaagagaaggtctcgatcgcgtgacagaaagcgtcaaaga
cgttcaagaagtagagaaagggaacggagccgagagaggaggagatcccggagccgagag
aggaggcgctccagaagcagaagtagagggagacggtctcgatcctccagtccaagcaag
aacaggaaaacagaaaacagatcaagatctaaagaaaagacagagggtgtggaagtttcc
aaagaaaagaaaaaagacaaagaagacaaagaagaagagaaggataaagatgctaccaca
aataccgtggccactgagaattttgatcagaacaaattagaagaagaaatgagaaaacga
aaagaaagagtggagaaatggagggaagagcaacgcaagaaggctatggaaaacatagga
gaactgaaaaaagaaattgaagagatgaaacaggggaaaaaatggagtttagaagatgat
gatgatgatgaagaggaaaccgcagaaggagaaaaagaaggcaatgaggttgaagatgaa
gagttagatccgttggatgcttatatggaagaagtaaaagaagaggtcaagaagttcaat
atgagaagtgtgaaaggtggaggcgggagtgaaaagaaatctggaccaactgttaccaag
gtagtaaccgtggtgacaaccaaaaaggcagctgtggagtcagaaaagaagaaaggggag
ctcatggagaatgaccaggatgcaatggagtattcctcagaagaggaggaagttgatctt
cagactgccctgactggctatcagaccaagcagagaaagctgctagaaccagtggatcat
ggaaagatagaatatgaacctttcaggaaaaacttctatgttgaagtaccagaactagct
aaaatgactcaagaagaggtgaatgtgtacaggctggagttggagggtattacagtcaag
ggaaaaggctgccccaaaccaataaaaacctgggtacagtgtggtatttccatgaagatt
ctcactgccctcaaaaaacatggctatgaaaagcccactcccattcaaacccaggctatc
ccagcaattatgaatggacgtgatttgattggcattgctaaaacaggaagcggaaaaact
attgcatttctgttgcccatgttcagacacattatggatcagagagcgttagaagaagga
gaaggtcccatagctgtcattatgacacctactcgcgagctggctttgcagattaccaag
gagtgtaagaaattctcaaagacacttggacttcgagttgtctgtgtttatggaggaaca
ggaatcagcgaacagatagctgaactcaaaagaggtgctgaaattattgtttgcacgcct
ggacgtatgattgacatgttagcagctaacaatggtcgggtgacaaatctccgcagagtc
acatacgttgtacttgatgaagcagacagaatgtttgacatgggttttgagcctcaggtt
atgcgcattgtagacaacgtcaggcctgatcgtcagactgtcatgttctctgctactttt
cccagagctatggaggcattagctcggagaatcctaagtaaacctatagaagtgcaggtt
ggaggcagaagcgttgtctgttctgatgtggagcaacatgttattgtcatagaagaggag
aacaagtttttgaagttactggagctactgggacactatcaggagaaaggatcagttatc
atatttgtagataaacaagaacatgctgatgggttgttgaaagatttaatgagagcctct
tatccttgcttgtctcttcatggaggtattgatcagtatgacagggacagcataattaat
gatttcaagaatggaatttgcaaacttctggtggccacatctgtggcagcaaggggcttg
gatgtaaaacaattgatgctggtggtcaattacagctgtcccaaccattacgaagattat
gtgcaccgagcaggccgaactggacgagccggcaataaagggtatgcatatacgttcatt
actgaggatcaggcacggtatgctggtgatatcattaaggctttggaattgtcggggaat
ccgattcctactgatttggagaagctctgggctgacttcaaagaccaacagaaggctgag
ggaaagttgattaaaaaaagcagtggattctctggcaaaggttttaaatttgatgaaaca
gaacaggctttggcgaatgaacgaaagaagctacaaaaagcagctcttggcttgcaagat
tcagatgatgaagatacagctgttgatatcgatgaacaaattgaaagcatgttcaattca
aagaaaagagtgaaagacatggcagcaccaggaacatcaaatgctcctacaccatcagct
gggaacgcggaaaaactggaaattgctaaaagattggctttgagaatcaatgcccagaag
aatcttggagcagaggcacaagtattggtccccttccactttaaggatgtgatgcagcag
gctacaaatgctatcctgagaggaggcacgattcaagctcctactgtatctgccaagacc
attgcagagcagctggctgaaaaaatcaatgctaagctcaattatgtacccatagagaag
caggaggaggagaagcaggatggaggacaaaacgaatcctttaagagatatgaggaagaa
ttagagatcaatgacttcccacagactgccagatggaaagttacctccaaagaagcgctc
cagagaatcagtgaatattctgaagctgctattacaatcagaggaacttacttccctcca
ggcaaagaacccaaggaaggagaacgaaagatttatttggcgatagaaagtgccaatgaa
ctggctgtacagaaagcaaaggcagaaatcacacgacttataaaagaggagctcatcaga
ttgcaaaattcataccaaccaaccaacaaaggaagatacaaagttctatga
DBGET
integrated database retrieval system
