Pelecanus crispus (Dalmatian pelican): 104038845
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Entry
104038845 CDS
T08340
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104038845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcri03021
]
104038845
03036 Chromosome and associated proteins [BR:
pcri03036
]
104038845
Transcription machinery [BR:
pcri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104038845
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104038845
PBAF complex
104038845
GBAF(ncBAF) complex
104038845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
104038845
NCBI-ProteinID:
XP_009491629
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIACLVIVLYAYKLREAETEEALVAAES
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggcggaggtttgacctgcagaatccatcccgaatggatcgaaatgtg
gagatgttcatgaacattgagaaaacactagtccagaacaattgtctgagcagaccgacc
atctacctcattccagatatagaattgaagttggctaataaattgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaagtcaaaggctacccaccatgtttatccaagt
cctacctcaatggatgacgatgaatggttgagacctgtgatgaaaaaagacaagcaggtg
ctggtacactggggcttttttccagacagctatgacacttgggttcatgccaatgaaata
gatgctgaaattgaggatcctccaattcctgaaaagccatggaaggttcatgccaaatgg
attttggacacagatatattcaacgaatggatgaatgaagaggattatgaggtagatgag
aacagaaaatcagtgagttttcggcagagaatctccatgaaaaatgaagagcctgtacgt
agcccggagaggagagacaggaaagcagcagcaagtacaaggaagagaaagcattctcct
tctccaccccccactcctgtggagtcgagaaaaaagacagggaagaaaggacaagcagcc
ttatatgggaaaaggagagggcagaaagaagaagatgagcaagaagatcttacaaaggac
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagtgaaaacacgcctgtgaaaggaggaacagtagcagacctcgatgaa
caggatgaggagacagtggcaactggaggaaaggaagatgaagatcctaacaaaggcgat
caaagtcggtctatcgatccaggtgaagataacgtcacagaacaaaccaaccacatcatt
attccaagctatgcatcttggtttgactacaactgtattcatgtgattgaacgtcgtgct
cttcctgaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcttac
cgcaacttcatgattgacacctatcgcttaaacccgcaagagtacttgaccagcactgcc
tgcagaaggaatctgacgggagatgtgtgtgctgtcatgagggtacatgcttttctggag
cagtggggtctcattaactaccaagtggatccagaaagccgtcccatggcaatgggacct
ccccctactcctcacttcaatgtgctggccgatacgccctccggactgatgcctctccat
atccgcactccgcaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaa
gagaagcctactgatctgcagaactttggacttcgcacagacatttactccaaaaagact
ttagcaaagagtaaaggtgcgagtgctggaagagaatggacagaacaagagacattgctg
ctattagaagctctggagatgtacaaagatgactggaacaaagtctccgagcatgttggg
agccgtacccaagatgagtgcattctccattttctgagacttccgatcgaagacccctat
ttggagaactctgatgcgtctctgggcccgctggcttaccagcccgtacctttcagccag
tccggcaatcccgtgatgagtaccgttgctttcctggcatcggtggtggatccccgcgtg
gcatcagccgcagcaaaggccgcgttagaggagttttctcgagtcagagaggaggtacca
ctggagcttgttgaagctcatgtaaagaaagtacaggaagcggcaagagcctctgggaag
gtggatccaacatacggattggagagcagctgcattgccggaacgggtccagatgagccg
gagaaaatcgcctgcctggttatcgtcctgtacgcctacaagctgcgtgaagcagaaaca
gaggaagctctggtggctgcggagtcttga
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