Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0470
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Entry
PC1_0470 CDS
T00934
Name
(GenBank) Ig family protein
KO
K20276
large repetitive protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
DUF4347
Cadherin_5
Cadherin_4
CLSTN_C
Motif
Other DBs
NCBI-ProteinID:
ACT11526
UniProt:
C6DJW3
LinkDB
All DBs
Position
complement(544713..553274)
Genome browser
AA seq
2853 aa
AA seq
DB search
MLWRQLFSKKSDHPTDHIEQAYSAPLGFVLESRVLFDGAIAATATQAETSNSSDATASSN
PAQTANHSAEATSENNTSSDQNSATHDITTDVVVQAVAGETIRKEAVFIDTALTDYQTLV
NSVPAGVDVFLLDSSKDGLTQMAVWAETHTGYDAIHILSHGNEGQVRLGNLTLDSATAEA
RSADLAKLGTALTQDGDLLLYGCDIAQDTGKSFVSLLSQLTQADIAASDDLTGAIAKGGN
WQLETTVGSIETNNAALGEITTNYNNLLASPTLGTNTFSQFSGTNTFVSSQSGVQSYDDI
NNGFTYVAYSTDRVTLQTVAISGNQVLNTIVAPGGNLNYFAIKSTDGSEFNLSNIDLRGL
GNYASTFTITGYKDGSAVAGATQTITLTTAFQTATLSNAFQNIDEVRLTTATLGNGTVQW
DNIVTAPVVASTDNVPSIAGSATNPTYTENGTDVGLFTNVIANTNDSGQTFTSATFTVTN
VADSTEYLNINGVKVSLINGNSVTLGSGYGSASVFLSAGTATISLSGETLSNADMGTLLS
GMTYGNSSENPHTTARVVTLTQVTDSGASNNSYSPGNIASTVTVVAVNDAPTDLALSNTT
FGQSLGSNGIVGTLSATDVDSTTFTYSLVSGAGSTDNALFILSGSTLRAVNAATMAAGTY
SVRLQVSDGQATYDKVITLTVADDIAPTFDATPTITAPTPDGFTLNTDLNERGTIYYVVL
PDGASAPSVSQVINGQNASGSLPLNFGSQLAGSAPYSQSLTLTGLAAATAYDVYVVARDS
AGNATLSVVKLDVTTAASSTAPTLSATGSNPVFIGGMAGAVDLFSGVSADTRDSGQTFNS
LTLTVSNVSDSGEFISVAGNTISLASNGSGTLTGIGSYTVTRVGNTVTLQLSGMSASNTQ
FAGLVDGLRYGNSNSSVTAATRDVSLTAVRDSGTSNNTTSLSLTSSVNVLASNSALYVTS
GDDTGDDASFGNSLQDDLNDGGGLSLREALHWANLTPGIDRIVFQTNVTLAEGLLVPTSS
MLIDGQSFTLNGGGYSGFQINTSSITLAIQNLTLTNFTTSTNQVTGGVLGIHYGATDINF
RLYNVDISGNTDDTWGTGMIDLFNIAPGRYIVDLDRVNIHNNVLFGGLNEEGVVRLFVAG
TQHTVSLSITNSAIYNNGSFNPASGNIGVAGIYVTASLSNATSTHISLMNTTITGQDAGM
VFGFTGGSTNWVANIRNSIISGNTVDVTTFYSGGTGGTYTLLGNNNLIGGTVNLISTADP
RLAATATNAINQGDRFSVTGDADARGLDRVRQGAVDIGAYESQFASGVSPQVDLNGASSG
NDYSATVSSGLSTGVPITDMLATLSQTDGDTRLWTLTLSLAGNANGSSEYLTLSQQALLA
AHAAGINVSGDGSQTVTLTGGASLDAFQTALRAIVYVNVATTPTAGNRTISVTANDDASS
SATSTLTVVVGNPPVVATPIPAQSVAQDGSLSFTVPAGTFTDPDVGDTLTLSATLANGSS
LPSWLTFNPATGTFTGTPGNADVGILSIKVTATDTTNASVSTTFSLTVTNVNDAPIVATP
IPAQSVAQDGSLSFTVPAGTFTDPDGDTLSLSATLANGSALPGWLTFNSVTGTFSGTPGN
ADVGTLSIKVIANDGNASVSTTFSLTITNVNDAPMVSATIPAQSVAQDGSLNFTVPAGTF
TDPDGDTLTLSATLANGSTLPSWLTFNPATGTFSGTPGNADVGTLSIKVTAHDGSASVST
TFNLTITNVNDAPVVATPIPAQSVAQNGSLSFTVPAGTFTDPDVGDTLTLSATLADGSPL
PGWITFNSATGTFSGTPGNADVGSLSIRVTATDGSNASVHTDFSLTITNVNDAPVVATPI
PAQSVAQGDSLNFTVPAGTFTDPDAGDTLTLSATLANGSPLPGWITFNSATGTFSGTPGN
ADIGSLSIRVTATDGSNASVHTDFSLTITNVNDAPVVATPIPAQSVAQDGSLNFTVPAGT
FTDPDGDTLTLSATLANGSPLPGWLTFNPATGTFSGTPGNADVGSLSIRVTATDGSNASV
HTDFSLTVTNVNDAPVVATPIPAQSVVQDGSLNFTIPAGTFTDPDGDTLTLSATLANGSP
LPSWITFNPATGTFSGTPGNGDIGNLSIKVTANDGDASISTTFSLTVTPSNQAPVVSTPI
PPQSVAQDGGFNFTVPAGTFSDPDGDTLTLSATLTDGSPLPSWLHFDPTIGTFSGTPGNG
DVGTLVIRVTATDGSNTSISTSFGLTVTNVNDAPVVATPIPPQSVAQDGGFNFTVPAGTF
SDPDGDALTLSATLADGSPLPSWLHFDPTIGTFSGTPGNGDVGTVVIRVTATDGSNTSVS
TSFGLTVTNVNDAPVVATPIPPQSVAQDGGFNFTVPAGTFSDPDGDTLTLSATLSDGSPL
PGWLRFDPAIGTFSGTPGNGDVGTVVIRVTATDGSNTSISTSFGLTVTNVNDAPVVATPI
PPQTVAQDGGFNFTVPAGTFSDPDGDTLTLSATLADGSPLPGWLRFDPAIGTFSGTPGNG
DVGTVVIRVTATDGSNTSVSTSFGLTVTNVNDAPVVATPIPAQSVAQDGSFNFTVPAGTF
VDPDGDTLTLSATLADGSPLPGWLRFDPAIGTFSGTPSNGDVGTVVIRVTATDGSNTSIS
TSFGLTVTRSIVGGDPQFKANDGLGRTPSFSDTRQQSTQDIAAAEQTLGGLIANPSLGSL
TLGNDGAPRSVMSAIFATGRQNTETGTLPVSQVAGAFGHGVASGIGVNFDSTLGSFPSFS
KDSALGGTSSLASTFSGIYLPSLTPMEVFSGGSWKDIPLDGASNAMNSTDDNTGRSVAFT
PSLHRQLQQIGDSELQRLAAIEQALQESGQQQG
NT seq
8562 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcgccaattattcagtaagaaaagtgaccatccaactgaccacattgagcag
gcttattccgctcctcttggttttgtccttgaatctcgcgtcttatttgacggcgcaata
gccgcaacggccactcaggccgaaaccagtaattcaagtgatgccacggcttcttctaat
cctgcacagactgccaatcattctgctgaagccacatcggagaacaacacatcatccgat
cagaatagtgctacgcatgacatcacgactgacgtcgttgtacaggctgtcgcaggcgaa
acaatacgtaaagaagcggtatttattgatacggcgctgacggattaccaaacactggtc
aacagtgtccccgctggggttgatgtgtttttattggatagcagtaaagacggactgacg
cagatggcggtatgggctgaaacccatacgggttacgatgcgatccatatattgagccat
ggcaacgaagggcaagttcgccttggtaatctgacgcttgatagcgctacggcggaggca
cgttcggccgacctggctaaactcggcacagcgttaacacaggatggcgatctgctgctc
tatggctgtgatattgcacaggacaccggaaaaagctttgtctctttactatcacagctc
actcaggcagatattgcagcctcggatgatttaactggcgccatagccaaaggtggcaac
tggcaactggaaacaacggttggcagcatagaaacgaacaatgccgcactgggtgaaata
accacaaattacaataacttactcgcatccccaactctcggcactaacacattctcgcaa
ttttcaggcacgaatacatttgtcagcagccagtctggtgtccaatcttatgatgatatc
aacaacggctttacctacgttgcttacagtactgacagagtaacacttcaaactgttgct
ataagcggtaaccaggtcctgaatacgattgttgctcctgggggaaatcttaactatttt
gcaattaaatcgacggatggcagcgaattcaacctatcgaatattgatcttagagggctg
ggcaattacgcatcaacgttcacaatcactgggtataaagacggtagcgcggtggcgggt
gcaacgcaaaccatcaccctcacgaccgcattccagacggcgacactctccaatgccttt
caaaatattgacgaggtgagattaacaacagcgacactcggtaatggtactgtccaatgg
gataatatcgtcaccgcacctgtcgtcgcttccaccgataacgttcccagcatagcaggc
tcagcgacaaaccctacctatacagaaaacggcaccgacgtcggcttatttaccaacgta
atcgctaacaccaacgacagtggacaaacctttaccagcgccacctttaccgtaaccaac
gtagcagacagtaccgaatacctgaatattaacggtgtcaaggtgtccttgatcaatggc
aatagcgtcacactcggcagcggttacgggtcggccagtgttttcctcagcgcaggcaca
gccaccatcagcctaagcggagaaacgctgagcaatgccgatatgggcaccttgctatct
ggcatgacctacggcaacagcagtgaaaatccccataccaccgcacgggtcgtgaccctg
actcaggtcaccgattctggtgccagcaacaacagctacagccccggcaatatcgccagc
accgtcaccgtggttgccgtcaatgatgcgccaacggatctggctctctccaacacgaca
ttcggccagtctctgggcagcaacggcatcgttgggacactgtcggcaaccgacgtagac
tccaccacctttacctacagtctggtgagtggcgctggcagtactgataatgcgctattt
atcctcagcggcagcacgctgagagcggttaatgccgccaccatggcagccggaacctat
tccgtgcgtctccaggtctccgacgggcaagccacctatgacaaagtgatcaccctgacg
gtggccgacgatatcgcgcctacatttgacgcgacacctacgatcaccgcaccgacacct
gacggttttacccttaatactgatctcaacgaacgaggcaccatctattatgttgtgctc
cccgacggtgccagcgcaccgagcgtcagtcaggtcattaacgggcagaacgcctcaggt
agcctgccactcaatttcggcagtcagttagccggcagcgcgccctacagccaatccctg
accctgacgggtttagccgcagccaccgcctatgatgtgtatgtggtggccagagacagc
gccgggaatgccaccctcagcgtggtcaaactcgatgtcaccaccgccgcgagcagcact
gcgccaacgctatccgccacgggcagcaatccggtctttattggcggcatggcgggagcc
gtcgatctgtttagcggcgtcagcgcagacacgcgagacagcggacaaacctttaactca
ctgaccctgaccgtgtccaacgtcagcgacagcggtgaatttatcagcgtggcaggcaac
accatcagtctggcgagcaatggcagcggcacgctgaccggcatcggcagttatacggta
acgcgcgtcggcaacaccgtgacgctacaactgagcgggatgagcgccagcaacacgcaa
tttgccggtctggtagatggcttacgctacggcaatagtaacagcagcgtcacagcggcc
acacgagatgtgtccttaaccgccgtcagagatagcggtaccagcaacaacaccacatcg
ctgagccttacctcgtcagtgaatgtattagccagcaacagcgcgctgtatgttacctcc
ggagacgataccggcgacgatgcgtctttcggcaatagcttacaagacgatctcaatgat
ggcggcgggctcagtctgcgcgaagccttgcattgggccaacctgacccccggtatcgac
cgtattgtgttccagaccaacgtcacgctggctgaaggcctgctggtcccgaccagttcc
atgttgatcgacgggcaaagttttaccctgaacggcggcggttattccggctttcaaatc
aacacgtcgtcaatcaccctcgccattcagaacctgacgctgacgaatttcaccaccagc
actaatcaggttaccggtggcgtattggggatccattacggcgcgacggacatcaatttc
aggctgtataacgtcgacatctccggcaataccgacgatacctggggcactggtatgatt
gacctgttcaatattgccccaggcaggtatatcgtcgatttggatcgggtcaatattcat
aataacgtgctgtttggcggcttgaatgaagaaggcgttgtccgactgttcgtagccggt
actcagcacaccgtctcgctgtcgatcactaattccgccatctacaacaacggcagtttc
aacccagccagcgggaatattggcgtggccggcatttacgtaacggcgagcttgagcaac
gccaccagcacgcacatcagcttgatgaacaccaccatcaccggtcaggatgcgggcatg
gtgtttgggttcaccggtggctcgacaaactgggtcgccaacatacgcaactcgattatt
tccggtaacacggtcgatgtcaccaccttctattctggtggtactggtgggacttatacc
ctgctcggcaacaacaatctgatcggcggtactgtcaacctgatttcgacggcagatccg
cgtctggctgcgactgccaccaatgcgattaatcagggcgatcgcttctctgtcaccggt
gacgcagatgcacgtggtttggatcgtgtgcggcaaggggctgtcgatatcggtgcttac
gaatcgcagtttgcctcgggtgtaagtccacaggtggacctgaacggtgcaagctcaggc
aatgactatagcgccaccgtctccagcggcttaagcacgggcgtgcctataaccgatatg
ctggcaacactctcgcaaaccgacggcgacacacgtctgtggacactgacgctctcgctg
gcgggcaacgccaatggcagcagcgaatatttgacgttatcgcaacaggcattactggcc
gcccatgccgcgggcatcaacgtgtcaggagatggcagccaaacggtgaccctcaccggt
ggtgcctcgctggacgccttccagaccgcgttacgcgccatcgtttatgttaatgtcgcc
accacgcccaccgcaggcaaccgaaccatttcagttaccgccaatgacgatgccagcagc
agtgcgacctcaacgttgacggtcgttgttggcaatcctcccgtggtcgcaacgccaata
cccgcacagagcgtggcgcaggatggaagcctgagcttcaccgtaccagcaggtaccttc
accgatccggatgtcggcgatacccttacgttgagcgccacgctggccaacggctcatcg
ttaccgagctggctcacctttaatccggccacaggcaccttcactggcacgccgggcaat
gcggatgtcggcatcctgagcatcaaagttaccgccaccgataccaccaatgcctcggtc
agcaccacctttagcctgaccgtcaccaacgtcaacgacgcgccaatcgtcgcaacgcca
ataccggcacagagcgtggcacaggatggcagtctgagcttcaccgtacccgcaggcacc
ttcacggatccagatggcgatactctctctctgagcgccacgctggccaacggttcagcg
ctgccaggttggctcacctttaattcggtcaccggcaccttctccggcacgccgggtaat
gcggatgtcggcaccctaagcattaaggtcatcgccaacgatggcaatgcctccgtcagc
accacctttagtctgactatcaccaatgttaacgatgcaccgatggtctccgccactatt
ccggcgcagagtgtggcgcaggatggtagcctgaacttcaccgttccggcaggcaccttt
accgatccggatggcgatacgctgacactaagtgccacattggccaacggttcaacgcta
ccgagctggctcacctttaatccggccaccggcaccttctctggtacaccgggcaacgcc
gatgtcggcaccctgagcatcaaagtcaccgcccacgatggtagtgcttcggtcagcacc
acctttaacctgaccatcaccaacgtcaacgacgcccccgtggtcgccacgccgataccc
gcacagagcgtggcacagaatggcagcctgagtttcaccgtacccgctggcaccttcacc
gatcctgatgtcggcgatacgctgaccctcagcgctacgctggccgatggttcgccgctg
ccaggttggatcacgttcaattcagccaccggcactttctccggcacccccggtaacgcc
gatgtcggcagcctgtcaatccgcgtcaccgccaccgacggcagcaacgcctcggtgcat
actgatttcagcctgacgatcaccaacgtcaacgacgcgcccgtggtcgcgacgccgata
cccgcacagagcgtggcacagggtgacagcctgaacttcaccgtacccgctggtaccttc
accgatccggatgccggcgataccctgacgttgagcgccacgttggccaacggctcaccg
ctgccaggttggatcacgttcaattcagccacgggcaccttctctggtacgccgggcaac
gccgatatcggtagcctgtctatccgcgtcaccgctaccgacggcagcaacgcctcggta
catactgatttcagcctgacgatcaccaacgtcaacgacgctccggtggttgccacaccg
atacccgcacagagcgtggcacaggatggcagcctgaatttcaccgtaccggctggcacc
ttcactgacccggatggcgataccctgaccttgagcgctacgctcgccaacggctctccg
ctgccgggctggctcacctttaatccggccactggcaccttctccggcacgccgggcaat
gcggatgtcggcagcctgtcaatccgcgtcactgccaccgacggcagcaacgcctcggtg
catactgatttcagtctgaccgttaccaacgtcaacgacgctccggtggtcgcgacgccg
ataccggcacagagcgtggtacaagatggcagccttaacttcaccataccggcaggcacc
ttcacggacccggatggcgataccctaacgttgagcgccacgctggccaacggctcaccg
ctaccgagctggatcacctttaatccggccactggcactttctccggtacgccaggcaat
ggtgatatcggcaatctgagcattaaggtcaccgccaacgatggcgatgcctcgatcagt
accactttcagcctgacagtcacgccatcgaaccaggctcccgtggtatccacgccaatc
ccgccgcaaagcgtggcgcaggacggcggcttcaactttaccgtgcctgcgggcaccttc
agcgatccggatggtgatacgctgacgctcagcgccactctcaccgacggctccccgctg
ccgagctggctgcacttcgatcccaccatcggcaccttctccggtacgccgggcaatggc
gatgtgggtacgctggtgatccgggtaacggccaccgacggcagcaatacctcaattagc
accagctttggcctgacggtgaccaacgttaacgatgcgcctgtggttgccacgccaatc
ccgccgcaaagcgtggcgcaggatggcggcttcaactttaccgtgcctgcgggcaccttc
agcgatccggatggtgatgcgctgacgctcagcgccaccctcgccgacggctccccgctg
ccgagctggctgcacttcgatcccaccatcggcaccttctccggtacgccgggcaatggc
gatgtcggcacggtggtcatccgggtaaccgccaccgacggcagcaatacctccgtcagc
accagctttggcctgacggtgaccaacgttaacgatgcgccggtggttgccacgccaatc
ccgccgcaaagcgtggcgcaggatggcggcttcaactttaccgtgcctgcgggcaccttc
agcgatcccgatggcgataccctgacgctcagcgccaccctctccgacggctcgccgctg
ccgggctggctgcgtttcgatcctgctatcggcaccttctccggtacgccgggcaatggc
gatgtcggcacggtggtcatccgggtaaccgctaccgacggcagcaatacctccatcagc
accagctttggtctgacggtaaccaacgttaacgatgcgccggtggttgccaccccaatt
ccgccgcaaactgtggcgcaggatggcggcttcaactttaccgtgcctgcgggcaccttc
agcgatcccgatggcgatacgctgacgctcagcgccactctcgccgacggctcgccgctg
ccaggctggctgcgcttcgatcctgctatcggcaccttctccggtacgccgggcaatggc
gatgtgggcacggtggtgatccgggtaaccgctaccgacggcagcaatacctccgtcagc
accagctttggtctgacggtaaccaatgttaacgatgcgccggtggttgctacccctatc
ccagcgcaaagtgtggcgcaggatggcagcttcaactttaccgtgcctgcgggcacattt
gtcgatcccgatggcgatacgctgacgctcagcgcgactctcgccgacggctcaccgctg
ccaggctggctgcgcttcgatcctgctatcggcaccttctccggtacgccgagcaatggc
gatgtgggcacggtggtgatccgggtaaccgctaccgacggcagcaatacctcaattagc
accagctttggcttgacggtgacacgcagcattgtgggcggcgatccccaatttaaagcc
aacgacggtcttggccggacaccatcattcagcgatacgcgccagcaatctacacaggat
atcgcggcagcagagcagacgttaggtggcctgattgccaatccgtcactcggcagcctt
accctgggtaacgatggtgccccgagatcagtgatgtctgccatcttcgccaccggacgc
cagaacacagagacaggcaccctcccagtcagtcaggtggcaggggctttcggacatggc
gtagccagcggcattggcgttaatttcgacagcacgttaggttccttcccgagctttagc
aaagattctgcactcggcggtacctcatcgctggccagtacgttctcggggatctatctg
ccttcgctaacaccaatggaggtcttctccggcggcagttggaaagacattccactagat
ggggcgagtaacgcaatgaatagcacggatgacaacactgggcgctccgtagcatttacg
ccctcgctccatcggcaattacaacagataggtgactcggaactgcaacgtctggccgct
attgagcaagcgttgcaggaaagtggtcagcaacaaggataa
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integrated database retrieval system
