Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3954
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Entry
PC1_3954 CDS
T00934
Name
(GenBank) PTS system transcriptional activator
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_3954
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC1_3954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
EIIA-man
AAA
AAA_22
AAA_16
PRD
AAA_5
Sigma54_activ_2
nSTAND3
RuvB_N
NACHT
Hpr_kinase_C
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACT14969
UniProt:
C6DH96
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Position
complement(4459768..4462377)
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AA seq
869 aa
AA seq
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MALSAKDKLFQNIITHYASNTHGFTALDCAGFIQVSRSVISHYLNRLCDEGKLHKQNTRP
VRFYIDTRPQTSPDAVIPLKHDDVFSELIGATGSLQQAISSCRSAVNYPGRGLPILLSGE
SGVGKSHLAAMIHLYAQDRGIVALDKPLVELNCADYANNPELLSATLFGYIKGAFTGADR
DKKGAFDDADGSFLFLDEVHRLSAENQEKLFLFMDKGYFYRLGDNRTRHSAAIRFIFATT
ENVDTVLLNTFRRRIPIRIALPNFISRPLTERVAQVEYFLRREASDLNCDIHMDSLLMHQ
LVASPIRGNIGELKNQVRVMCASAWSENQHSEYIALQPLQPGQMNGDTLVFSARKPSASL
DISSLLPKAMRDDVIFKEFCHSGNTLLLNRKLEQLLTTLNCTVQKEELYSGYIWQNTMRA
INELENQTGIECNADYRKTVWLCLHYAMNNASEAQYINELTAITDYVSAKARLLALECLC
LLKKYVTNTDYPLLMPLLSCAMNKLSGDDDLIQGVIVSHGRSTASSIAGIANQLTGGYYF
KAFDMPNSTSTREIIDLLIAHLDSIKQRAGLIILVDMGSLKEIYEEIKLHLHGELLVINN
VSTAMALDIASKIQSRLSMEEIIDGVKGAYEVETRYYAGMLPGNKIIISCISGEGISRKL
RDIVLRYLASDTIDIVTMEYDDLKYKLSQADPALNGTRLVITTTALDAGYIPIISVEQLI
KEKFDILHRDYFTDLLISGGMEPMIDEVVKLFTVEGVAGRLNFLNPVIIIDEVEAVIKQY
EFFYKIHFESYLRINLFMHIALMIERVMVNTGMCHRDDSALTAEQQAFVDVHDTFFQVLN
RKYHIVVPLTEVLMIYEIMEPWISSDPTP
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtccgcgaaagataaactgttccaaaacatcatcacgcactatgccagtaat
acccatggattcacggcgctggattgtgccggttttattcaggtcagccgtagcgttatc
agccattaccttaatcgcctgtgcgatgagggcaaactccataagcagaatactcgccct
gtccgtttttatattgatactcgtccacaaacttcgccagatgcagtgataccgctcaag
catgatgatgtttttagtgaactgattggtgctacaggaagtttgcagcaagccatctct
tcttgtcgttctgcggtgaattatcctggtcgggggctaccgatattgctctctggcgag
agtggcgtcgggaaaagccacctggcagcaatgattcatctttatgcacaggatcgcggt
attgttgccttggacaagccattggtcgagcttaactgtgccgactatgccaacaatccc
gaactgctttccgcgacgctgtttggctatataaaaggggcatttactggagccgatcgg
gataaaaaaggtgcctttgatgatgctgacggcagtttcctgtttcttgatgaagtgcat
cgcttatctgcggaaaatcaggaaaaactctttttatttatggataaaggttacttctat
cgtttgggagataaccgtactcgccactcggccgcgatccgctttatttttgccacgacg
gaaaatgtcgatacggtgttgttgaatacttttcgtcggcgtattcccattcgtattgcg
ctaccaaactttatttcccgtccgctgaccgagcgggttgctcaggtagagtatttttta
cgccgtgaagcgagcgatctgaactgcgatattcatatggatagcctgttgatgcatcaa
ctggtggcgtctcccattcggggaaatattggcgaattgaaaaaccaagtcagagtgatg
tgtgccagtgcatggagtgaaaaccagcattcagaatatattgcattacagcccctccag
cccggccaaatgaatggcgatacgctggtgttctctgcgcgaaaaccttcagcttccctc
gatatttcatcactgttgccaaaagcgatgcgggatgacgtgatattcaaagagttttgt
cacagcggcaataccctactgttgaatcgaaagctcgaacaactgctcaccacgcttaac
tgcaccgtgcagaaagaggaactctacagcggctatatctggcaaaacacgatgcgggcc
attaatgagttggaaaatcaaacgggtattgaatgtaacgcagactatcgaaaaacggtt
tggctttgcctgcattacgccatgaataatgccagtgaagcgcaatacatcaatgaactg
acggccatcaccgattacgtttctgcaaaagccaggctgctggcgcttgaatgcctctgt
ttgttgaaaaaatatgtgacaaacaccgactatcctttgctgatgccgctgctgagctgt
gccatgaataaattatccggcgatgatgatttgattcagggcgtgattgtctcccacggt
cgctccacggcttccagtattgcagggattgcaaaccaactaacgggcggatactacttt
aaagcgtttgatatgcccaactcgacctcgacacgcgagatcattgatctgttgattgcc
catctggatagcatcaaacagcgtgcagggttgattatattggtcgatatgggatcgctg
aaagagatctatgaggaaataaaactgcaccttcacggtgagttgttagtcattaataat
gtcagtacggcgatggcgctggacattgcatctaagattcagagtcgattgtccatggaa
gagattatcgacggcgtaaaaggcgcctatgaggtcgaaacaaggtattacgcgggtatg
cttcccggtaataaaattatcatttcatgtatatctggtgaggggatttccagaaagctg
agagatattgtattacgctatctggcctctgacacaatagatatcgttacaatggaatat
gatgatttaaaatacaaactgtcacaggccgatccggcattaaatggcacacggctcgtc
attactacgactgcgcttgatgcaggttatatccccattattagtgttgagcaattaata
aaagagaagtttgacatcctgcacagggactattttaccgacctgcttatctccggtgga
atggaacctatgattgatgaagtggttaagctatttacggtagaaggcgttgccggacgt
cttaatttccttaatccggtgattattattgatgaagtggaagccgtgattaagcagtat
gaatttttctacaaaattcattttgagagctatttacgcattaatctgtttatgcacatt
gcgctgatgattgaacgggtcatggtcaatactggcatgtgccatcgtgatgactccgct
ctaacggctgaacagcaggcgtttgtcgatgttcacgatacgttttttcaggtactgaac
cgtaaataccatattgtcgttccattgacagaagtgctgatgatttatgaaatcatggag
ccctggatttcttcagaccctacgccgtaa
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