Candidatus Protochlamydia amoebophila: PC_RS00600
Help
Entry
PC_RS00600 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu00521
Streptomycin biosynthesis
pcu00523
Polyketide sugar unit biosynthesis
pcu00541
O-Antigen nucleotide sugar biosynthesis
pcu01100
Metabolic pathways
pcu01110
Biosynthesis of secondary metabolites
pcu01250
Biosynthesis of nucleotide sugars
Module
pcu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PC_RS00600
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PC_RS00600
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PC_RS00600
Enzymes [BR:
pcu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PC_RS00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF1411
Motif
Other DBs
NCBI-ProteinID:
CAF22848
UniProt:
Q6MF01
LinkDB
All DBs
Position
194405..194959
Genome browser
AA seq
184 aa
AA seq
DB search
MEIIDLQLKGLKLVKPNVFKDNRGFFLESFQQPLYQKMGIQETFLQDNHSFSQKGCIRGM
HFQSFPGQAKLVRVAVGKIYDVAVDIRPESPTFGQWEGIILDDKKHHQLFIPVGFAHGFC
VLSQEAHVMYKVSTPYDPLYEKGFRWNDSQLNIQWPIEQPIVSERDKQSPSFRESMLQLT
EIRK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcattgatttgcaacttaaagggttaaaattggtgaagcctaacgtatttaaa
gataatagaggtttttttctagaaagttttcagcaacccctctatcaaaaaatggggatt
caagagacttttttacaagataatcattctttttctcaaaaagggtgcattcgtggaatg
catttccaatcttttccaggtcaggcaaaacttgtgagagtggctgtgggaaaaatttat
gatgtggctgttgatattcgtcctgaatctcctacatttggacagtgggaagggattatt
ttagatgataaaaaacaccatcaactttttattccagtgggatttgcgcatggattttgc
gttttgagtcaagaagcccatgtaatgtataaagtgagcactccctatgatcctctctat
gaaaaaggttttcgttggaatgattcacaattaaatattcaatggcctatagagcaacca
atagtttctgaaagagataaacaatctccttcctttcgtgaaagcatgcttcaattaact
gagattagaaaatga
DBGET
integrated database retrieval system