Candidatus Protochlamydia amoebophila: PC_RS05340
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Entry
PC_RS05340 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu00500
Starch and sucrose metabolism
pcu01100
Metabolic pathways
pcu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PC_RS05340
Enzymes [BR:
pcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PC_RS05340
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
ISOA1-3_C
CBM_48
Alpha-amylase_C
DDAH_eukar
Motif
Other DBs
NCBI-ProteinID:
CAF23830
UniProt:
Q6MC69
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Position
1346753..1348765
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AA seq
670 aa
AA seq
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MNIQITPGSPFPFGANIQEGKVNFALYAKNIEKISLCLFNENDPLNPFKEIELEPSLNKT
GNVWHIAIESLPPYTLYAFRVPVENSNYLLIDPYAKSIYSSPDWGNAKPYSPLGRIIPLT
TFDWEGIPSPKLPSKDLIIYEMHIRGLTQDQSSQVSHPGTYLGVIEKIPYLKELGINAVE
LMPIYEFNESEALQINPKTQQKLVNYFGYSTVNFFSPMNRYASEIQENKTLVEFKTMVKE
LHRHGIEVILDVVYNHTFEGNQMGPIQSFRGLDKHAYYMIDEQGNYLNFSGCGNTFNANH
PIVKEFIIQSLRYWVTEMRVDGFRFDLASILCRSENGTPLNPSPLIEAISHDPILSQTKL
IAEAWDAGGLYQVGGFYPGQRWAEWNGHYRDIVRRFIKGTSGHKTAFATALSGSQDLYGW
RGTPCCSINFITAHDGFSLADLVTYNDKHNLDNGEENRDGFDHNDSWNCGIEGHSNNKKI
VALRERQIRNFLLALLVSQGIPMILMGDEYAHTRDGNNNTWCQDNKLNWFLWDKLLEKQS
VFRFFKSLITFRKNYPLLKRDTFLEETDVTWHGQVPFNPDWENDNKFIAFSLNIPHEGPD
LYVAFNASHVVLTVTIPPARQGMHWVWLVNTHNVAPGDFFEESCRKRVNSNTLKIPSYTS
IALKAEVDRS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacaaataacacctggatccccctttccttttggtgcaaatatacaagaagga
aaggttaattttgctctttatgctaaaaatattgagaaaatttctctctgtttattcaac
gaaaatgatcctttaaatccttttaaagaaatagaattggagccttcattaaataaaaca
ggaaacgtttggcatatagcaattgaatcgcttcctccttacacattgtatgcttttaga
gtacctgtagaaaactcaaattatttattaatagacccttacgcaaaatctatttatagc
tctcctgattggggaaatgcgaaaccgtactcccctcttggtagaattattccgttaaca
acttttgattgggaaggcataccatctcctaaacttccttcaaaagatttaattatttat
gaaatgcatatacgggggctaacacaggatcagtcgagtcaagtctcccacccaggaact
tatttgggagtgattgagaaaatcccttatcttaaagagttaggaataaatgctgttgaa
ttaatgcctatttacgaatttaacgaatcagaagccttacaaattaatccaaaaactcag
caaaaattagtgaattactttggatattctacagtaaattttttttctccgatgaatagg
tatgcaagtgaaatccaagaaaacaaaacgttagttgaatttaaaacaatggttaaagaa
cttcaccgtcatggaattgaagtcattttagatgtagtttataaccatacatttgaagga
aatcaaatgggacccatccaatcctttcgagggttagataaacatgcttattatatgatc
gatgaacaaggaaattatttaaacttttcaggttgtggaaatacttttaatgccaatcat
ccgatcgtcaaagaatttattatccaatcgcttcgctactgggtgacagaaatgcgagtg
gatggatttcgttttgatttagcttccatcttatgccggtctgaaaatggcacgccactc
aatccatccccactcatcgaagcaatttcacacgatcccattttatcacaaaccaaattg
atcgctgaagcctgggacgcaggtggcttataccaagtcggtggattttatcccggccaa
cgttgggcagagtggaacggtcattatcgagatatcgtgaggcgttttattaaaggaact
tcaggccataaaacagcttttgcgacagcattaagcggatcacaagatctttatggttgg
cgaggaactccttgttgtagcattaatttcatcacagctcatgatggatttagcctggca
gatttagtaacatacaatgacaagcacaatttagataatggcgaagagaatagagacgga
tttgatcacaatgatagctggaactgtggaatagaggggcattctaataataaaaaaatt
gtcgctttacgagaaagacaaattcgtaatttcttattagccttattggtttcgcaagga
atccccatgatattaatgggtgatgaatacgcgcatacaagagatggaaataataacacc
tggtgtcaagacaataaattgaattggtttttatgggataaacttctggagaaacaaagt
gttttccgattttttaaatcattaatcacgtttagaaaaaattatcctctccttaaacgt
gatacatttttagaagaaacggatgtcacttggcatgggcaagtgcctttcaaccccgat
tgggaaaatgacaataaattcattgctttttcacttaatattccacatgaaggccctgat
ctctatgttgctttcaatgcctctcacgttgttttaacagttactattcctcctgcaagg
caaggaatgcattgggtttggttagtcaatacccataacgtggctccaggagattttttt
gaagaaagttgtcgtaaacgtgtcaattcaaacacacttaaaattccttcatacacttct
attgcgctaaaagcagaagtagataggtcgtaa
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