Psilocybe cubensis (magic mushroom): JR316_0004490
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Entry
JR316_0004490 CDS
T08288
Name
(RefSeq) Pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0004490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0004490
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JR316_0004490
Spliceosome [BR:
pcub03041
]
Complex A
U2 snRNP components
U2 related factors
JR316_0004490
Complex B
JR316_0004490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
71970811
NCBI-ProteinID:
XP_047750015
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All DBs
Position
4:complement(1176290..1179825)
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AA seq
1066 aa
AA seq
DB search
MARRDRSISPETPNKRVRQSHRSPRSPSPTRRSSTQRSSNGRSRYDDDRDRDRDRDRDRD
RHRDKDRDRYRDDRYRDDRRRDSYRDDRRRSRSRERRPSPPRPAAPAEPVATPPPEDEKI
RAKRAKLEAWKKEREAKKALDEAKAKAMALAGKSMPAPAVPPAATTKAPGQLNRSALNGL
GLKGLPLKPDFANPSKALVTALDDSVESKRKLETLGDMPAIDMTMVEDEAGVGDLEVDDD
DEEANRMDQALKAKAKDAMEVEEEEEDPLDAFMNEVKQEVKKVNMQDMQKFAQSTGGRSR
IRLDERMAEDGAEDETETAVPDELDATELNPEDILALAAKKAKKKELATVDHSRVHYEPF
RKEFYVPPPDIAAMSEDDAELLRLELDGIKIRGLDCPKPVTKWSHFGLPANCLEVIKRLN
YTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLEQMEGPLAVIM
TPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAELKKGAEIIVCTPGRMIDLLT
ANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFPKQMDSLA
RKILRKPLEITVGGRSVVAAEIEQIVEVRSEETKFNRLLEILGQMYNEDPECRTLVFVDR
QEAADNLLRELMRKGYLCMSLHGGKDQVDRDSTIADFKSGVVPIVIATSVAARGLDVKQL
KLVINYDCPNHMEDYVHRAGRTGRAGNKGTCVTFVTPEQERYSVDIYRALKASNVTVPKD
LEDLSNGFLDKVKSGKAQAAGSGFGGKGLDRLDKERDAREKAERKAYGEPTGAEEEKISS
AEEVAVKAVAASTDDMTFGNFKVEIKRGPAPDSSKGLLGVGGAVAAARRLAHAKEEEKIQ
SQMRAAEEAAARAGKDTAAHKQALSVVAKLNAQMRASKLVLQSQLQAEESGASRKANPDS
TDFHAIIPINDYPQKARWRVTNKETMVQLIDMTGASVTNKGIYYEHGKEPPPEGPPKLHL
LIESNEEFRVEQAVREIKRLLIEASAAALQAEMRNPTATMGRYSVL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcagagatagatccatctctccagagacgccaaacaaaagggtaagacaatcc
catcgctcacctcgctctccgtcgccaactaggcgcagcagcacccagcggtcctccaat
ggacggtcaagatacgacgacgaccgggacagagacagagacagggaccgcgaccgcgac
cgtcatagagacaaagacagggacagataccgggatgacagatatcgcgacgacagacga
agagactcgtatagagacgatagaagacgctctcgctctcgcgaacgaagaccttctcca
ccccgtccggcagcaccagcagagccagttgcaacgccccctccagaggacgaaaagatc
agggcaaaaagagccaagcttgaggcttggaaaaaagagcgtgaggcaaagaaagctctc
gatgaagccaaagccaaagccatggctctggcgggcaaatccatgcctgcaccagcggta
cctcccgcggccactacaaaggctcccggtcaattaaatcgttctgctcttaatggtttg
ggccttaaaggactccctcttaagccagactttgcaaacccttccaaggccctcgtcact
gctctagatgactctgtagaatcaaaacgaaaactcgaaacattgggcgacatgccagcg
attgacatgaccatggtggaagatgaagcgggggtcggcgatttagaagttgacgacgac
gatgaagaggcgaatcgcatggaccaagccctgaaagccaaagccaaggacgcaatggaa
gttgaggaagaagaagaggacccgttggacgcgtttatgaatgaggttaaacaggaggtc
aagaaagtcaatatgcaagatatgcagaagtttgcccagtcaacgggtggtcgctcaaga
ataaggctcgatgaaaggatggctgaagatggcgctgaggatgaaactgaaactgctgtg
cctgatgaactcgacgccactgagctcaaccccgaagatattctcgctcttgcagccaaa
aaggccaaaaagaaagaactggctaccgttgatcactctcgagtccattacgagccattt
cgtaaagagttctacgtgcctccgccagatatcgcagctatgtcggaggacgatgctgaa
cttctccgacttgaacttgatggtatcaaaatccgtggtctcgattgtccgaaaccggtc
acgaaatggagtcattttggtctacctgctaattgtcttgaggtaattaaaaggctcaac
tacacagcccctacttcgatccaggcgcaggccataccggcaatcatgtcagggcgtgat
gttattggcgtggctaaaacgggttcaggaaaaactatagcatttttgctgcctttattc
cgtcacattaaagatcaacgacctttagaacaaatggaaggtcctcttgcagttatcatg
actccgactcgtgaattagctgtccagattcatcgagagtgcaagcccttcttgaaggtt
cttaatctacgggctgtttgcgcttatggaggttctcctatcaaagatcagatcgcggaa
cttaaaaagggggcggaaattatcgtctgtacccctggtcgcatgattgaccttttgact
gcaaattcaggacgcgttaccaacctgaagagggttacttatgtcgtattggatgaggct
gatcgtatgtttgacatggggttcgaaccccaggtgatgaaaatcgtcaataacatacgg
cctgacagacaaacggtactcttttcggccacattcccaaagcaaatggactcgcttgcc
cgaaaaattctccgaaaaccactcgagattactgtgggtggacgttctgttgtcgcagcc
gaaatcgaacaaatcgtcgaggtgcgctcggaggagacaaagttcaataggttactcgag
atattgggccagatgtataacgaggacccggaatgcagaacgttagtgtttgtcgatcgc
caagaggctgctgataatctgcttcgtgagcttatgcgcaagggttacctgtgcatgtcc
ttgcacggcggcaaagaccaggtcgaccgcgattcaaccatcgcagatttcaaatctgga
gttgtccccattgtcattgctacttccgttgctgcccgtggtttggatgttaagcaactc
aaactagtcatcaactatgattgtcccaatcacatggaagattatgtccatcgcgcagga
cgaacaggccgtgcgggcaacaaaggaacttgcgttacttttgttacccccgagcaagaa
cgatattcggttgatatttatcgtgctctcaaagctagtaacgttacggtaccgaaagac
cttgaagatctatccaatggattcttggacaaagttaaatccggaaaggctcaagctgcc
ggttctgggtttggtggcaagggtctcgataggttggacaaggagcgcgacgccagagaa
aaggccgagcgcaaggcctacggtgaacctactggcgccgaagaagagaagatatcttct
gcagaagaagtggcggtgaaggctgtcgccgcgagcactgatgacatgacctttggaaac
ttcaaagtcgagatcaaacgtggccctgctcccgattcatcaaagggtctcctcggagtt
ggcggtgctgttgcggctgcacgcaggctcgcccatgccaaagaggaagagaaaatccaa
agccagatgcgtgcagcagaagaagccgccgcaagggccggcaaggacactgccgcgcac
aaacaagctctcagtgttgtcgcaaaactcaatgcccaaatgcgcgcgtccaagttggtg
ttacagtcccagctgcaggcagaagaatctggcgcttctcgaaaggcgaaccccgattca
accgatttccatgccatcatacccatcaacgattatcctcaaaaagctcgttggcgtgtt
actaacaaggagaccatggtacagctcatcgatatgactggtgcttcggttaccaataag
ggtatctactatgaacatggaaaggaaccccctcctgaaggaccccccaaacttcatctt
ctcattgaatctaatgaggaattcagggtcgagcaagccgtcagggaaatcaaaaggttg
ctcatcgaagcttcagcagctgccttgcaagcagagatgcgtaatccaacagctacgatg
ggcagatacagtgtgttgtag
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