Psilocybe cubensis (magic mushroom): JR316_0008150
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Entry
JR316_0008150 CDS
T08288
Name
(RefSeq) DNA ligase 4
Organism
pcub
Psilocybe cubensis (magic mushroom)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Forkhead
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
LIG3_BRCT
PTCB-BRCT
KIAA1328
Solute_trans_a
Motif
Other DBs
NCBI-GeneID:
71974470
NCBI-ProteinID:
XP_047747180
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All DBs
Position
7:1888829..1896853
Genome browser
AA seq
1975 aa
AA seq
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MQPTPAPTSAPNSPGPPEGTHDTPLVEEQTYTAPPQNVDSAPFGVLVALFERLQNERKPE
RRRKLLLTWFTHWRNEKGFDLYPVLRLLLPQKDRERSVYGLKEKNLGKTYIKMIPLGQRD
PDAQRLLNWKKPTDRDKAAGDFSTVLYEVVGKRSSVIEGSLSIDDLNHLLDQLSSNSGKQ
DVQSKILQRVYNRATPEEQRWIVRIILKDMTISVKETTIFSVFHPDAQDLYNTCSDLKKV
AYDLWDPSHRLKNEDKTVQLFQAFAPMLCKRPTNTIEETVRLMGGVEFYIEEKLDGERMQ
LHKRANEYFYCSRKGKDYTYLYGKDIGQGSLTPYIRQAFDGKAVTEIVLDGEMLVWDPVS
ERNLPFGTLKTAALDKSKHEFNPRPCFKVFDILYLNGNSLLSLKVQHRKEILRKYVKEVK
GRIEFAVQWKGTDAKDIRERMDQIMESRGEGLVIKNSLSRYELNGRTNGWIKVKPEYMDN
MGETVDVVVVGGNYGTGTRRGGAVSTLICAVFDDRRSYDNDEDPKYSTFVRIGTGITYAD
YLWIRALPWKEWKKGTTPDFLQTSKKGTDDKGDLYLHPDDSFILKVKGAEIIPSGKYQYQ
LGYTMRFPRAVAFRSDLTIMDCMPASAILESLRNDKKRKMSSDISSSNKKRKITTSKPAI
LERYKGVKAKDVHVESKLLEGLTFVVLSDSKSKTANEDRKFIETQIYANGGICAQISGPG
KIVIYGGSTTPYNIKQIINKGRDIIKPSWILDSISKGERMPLRKRYFFHATEESIASEEY
DAEDDEQDQEAAGSGIASRSPSVDNRQGEPASSDIHGDKPVSPKVEEMEIDPELAEWFKV
DQQTSGYSEDKDIQDNDSVTEDDDSDNADVAGDEEADLDDWLQVKVQEAKPPIEENAATQ
YEDDDDVKMGESDKAMEYDQDLIFKHLCFYMDSPDNAIKNGLTVKPSKHEADMNVKLSQI
AELVIAHGGKVVTDLDNPKLTHVVVDQRDVRRRIELIKRTSKPKMRNLVISDYIQACLDE
GTLLDNAGCLSSFIYIMGDLQVSPISQLLHTLGITREDLNKRSDQMRQFLTADDAMSSRV
PERDNAYRPRSGSDLHSSSRSVGSSRSFARSLSRASSSSVRDGTPPATPVKSEPREGEIP
HRRMDSMEMVLERQRRQRKSRREKERESSKAVPHPPSPSPSIASHSGHNLDSYMQSRDDV
QPPSSSSSSRSNPPSVTNDPPLPITPQKSKYYRDHTNLDSESARKDTALKTETPTPTRAS
APPPPQSLPQPQYYAYPGYMGYPHFMPMAYRPATATSSFPITPQAQRTLPARQTATSPLP
PSSPPPASSPMSSPARRINLVSSPGPMGPAPEENEYDNLPYKLPPGPYSPSKPDLSYAAL
VGRAILSSPEHRLTLQEIYDWITIVYPHYKRGETTWMNSIRHVLSTTVCFRKVPRDRSVG
RTLWAIYDEDIECFKDGGFKKHLCKDYVNGNDGKEKQSGSSKGKARARKRVDDEEAIEGR
KTKKLKKEQCAITGNISTFDSHVAGPSFMGSSTLSSRPLFPPTRPTAHHQPYYQSCVPQT
QGFPTEVIFPPLPAAAAFNRVVNNLNTSHNNNVSSSTTLTTIKDSSAVEASPPPSSSSPI
LSASSISSSSLSSSIPELTPNLSSSSPPSSLPATSDIDIDCPESRPMSVKPDVLHDIGNT
ALAISDIFTDEGEADTSTPAECTEDDIFNTALLGPVTTWGQSPKVPGLLQPGIELLESNT
DSDEDSDISIRDRKGKKKQGTRNYKGSVFPPMPSSPSLNRGKHASANSENAGRPSTPASL
PALPSTPPRSSILDHQISSTRTPLSHKGLHMSPSASLAHYKSNLDPPPVYNGSIPALDNP
QADEEDLMRTPRKRGTNASAPTSFGPPVTPRKLIFSANLEDSPFRTPSNNLNMSPFRTPG
SRSIFDPHDPRTLLDEELSGMHYNYDSSPASGLFGRGRGSLLYDSPGFESPAKWW
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgacgcctgcaccaacttctgcacccaattcaccgggacctcctgaggggacc
cacgatacaccgttggttgaggaacagacctatacggcgccaccacaaaatgtcgacagc
gcgccgtttggtgttctggttgcactgtttgaaagattgcaaaacgaaagaaaacccgaa
aggcgtcgaaagctccttttgacttggtttacccactggcgcaacgagaaagggttcgat
ttgtatccagtattaagactacttcttccacagaaagaccgtgaacgctctgtctatggc
ttgaaagaaaaaaacttgggcaaaacctacatcaagatgatacctcttggacaaagggat
cctgatgcgcaacggttactcaattggaaaaagcctacagatcgtgataaagcagctggc
gatttctccacagtattatatgaggtcgtagggaaacgatcttcagtaattgaaggatcg
ctatcgatagatgacttaaaccatcttctggatcagctctcgagcaactcgggaaagcag
gatgtgcagtcgaaaatattacaacgggtgtataaccgcgccacccctgaggagcaaaga
tggattgttcgtatcatattaaaagatatgaccatttccgtcaaggaaacaaccattttt
tcagtgtttcaccctgatgcacaagatctctacaatacatgctcggatcttaaaaaggtg
gcttatgacctctgggacccttcccatagattgaagaacgaggataaaacagtccaatta
tttcaagcattcgctccgatgctttgcaagcgacccacaaatacaatcgaggagactgta
cgcctaatgggtggcgttgaattttatattgaagaaaagctagacggagaaagaatgcag
cttcacaaacgagcaaacgagtacttttactgctccaggaaagggaaagattatacctat
ctgtatggaaaagatattggacaaggcagtttgacaccgtatatccgtcaagcatttgat
ggaaaagctgtcactgagatcgtattagatggtgaaatgctggtttgggatccggtgtcg
gaacgtaacctacccttcgggactttaaagacagcagcgttagataaatctaagcacgag
tttaacccccgtccatgtttcaaggtgttcgatatcttgtatctgaacggaaattctctt
ctcagtttaaaggtccaacatcgaaaagaaattttaaggaagtatgtcaaagaagtaaag
ggacgcatcgaattcgcagtacaatggaaagggactgatgctaaggatatcagagaaagg
atggaccagattatggaatctcgaggagaagggcttgtgattaagaattctttgtcgaga
tatgagcttaatggacggactaatggttggattaaggttaaacctgaatatatggataac
atgggcgaaacggttgacgtcgttgtcgttgggggaaactatggtactggaactcggcgt
ggaggggcagtatcaactctgatttgtgccgtatttgacgatcgcaggagctacgataac
gacgaagatcctaaatacagtactttcgttcgaattggcacaggcataacatatgcagat
tatttgtggatacgagcacttccctggaaggaatggaaaaaggggactacgcccgatttc
ttgcaaacttcaaaaaaaggcacagatgataaaggggatctctatcttcatccagacgat
tcttttatacttaaggttaaaggagccgaaattatacccagtggcaagtatcaataccag
ttaggctatacaatgaggttccctcgagcagtggcgtttaggagtgatctgactataatg
gattgcatgcctgcttccgccattttggaaagtttacgaaacgataaaaagaggaaaatg
tcgtcagatattagtagttccaataagaagcgtaaaattaccacttctaagccggctatc
cttgaacgatataaaggcgtaaaggccaaagatgttcatgttgaaagcaaactgcttgag
ggtctgacatttgttgtcctgtcggactccaagtccaaaacggcgaatgaagacaggaaa
tttatcgagacacaaatatacgcaaatggtggtatttgcgcccagatatcaggtcccgga
aagattgtgatttatggaggttctacgacaccatataacattaaacaaatcatcaacaaa
ggaagagacattattaaacccagttggatcttagactccatctcaaagggcgaacgaatg
ccattgcgcaagagatatttttttcatgcaactgaagaatctatcgcctctgaggagtac
gacgcagaagacgacgagcaggaccaagaagccgctgggtctggcattgccagtcggtca
ccttcagttgacaacaggcaaggagagccagctagctcagatattcacggggacaagcca
gtttcccccaaggtggaagaaatggaaattgatcctgagctagctgaatggtttaaggtt
gaccaacaaacttcaggctattcggaggacaaggacatccaagacaacgattcggtgacg
gaagatgacgactccgacaatgctgacgtcgctggggatgaagaggccgaccttgatgat
tggttacaagtgaaggttcaagaagccaagcccccaattgaagaaaatgcagcaacgcaa
tatgaggacgatgatgacgtcaaaatgggagaaagcgacaaagccatggaatacgatcaa
gacctcattttcaaacatttatgcttttacatggactcgccagataacgctatcaaaaac
ggattgactgtcaaaccaagcaaacacgaagcagacatgaacgtcaaactttcccagatc
gcggaattagttattgcccacggaggcaaggtggtcaccgaccttgacaatccgaagttg
acccatgttgtggtcgaccagcgggacgtcaggcgacgaatagagttgattaaacgcaca
tcaaaacctaaaatgcgaaacctcgtaatttctgactacatccaagcgtgtttagacgag
ggaacgttattggataatgcaggctgcctcagctccttcatatacataatgggcgaccta
caagtatcacctatatcacaactcctccatacgcttggaataacgcgtgaagatctgaat
aaacggagtgatcaaatgcgacaatttctcaccgccgacgatgccatgtcttcacgcgtc
cccgagcgcgacaatgcctaccgaccaaggtccggatcggatttacactccagctcacga
tcagtagggtcttcacgatcttttgcgcgttctctgtcgcgtgcaagctcatcctcagtt
cgcgatggcactccgccagcaactccggtcaagtccgaacctcgtgaaggcgaaataccg
cacagacgcatggatagtatggagatggtattagaaaggcagagaaggcagagaaagagt
cgtcgggaaaaagagcgcgaatctagcaaggcagtgccacatcccccttccccatccccc
agcatcgcgtcacattcaggtcataaccttgactcctacatgcaatcacgcgatgatgtc
caaccgcccagctcttcaagtagcagtcgatccaatccgccctcagtgaccaatgacccc
cctctgcctatcactcctcagaaaagcaaatactacagagatcacacaaaccttgattcg
gaatcggctcgtaaagataccgctttgaagactgagacaccgactcccacgcgcgccagt
gctcctcctcctcctcaaagtcttccccagccgcaatactatgcttacccaggatatatg
ggatacccacatttcatgcctatggcatacagacccgccacggccacctcttcctttcct
atcacaccacaggcgcaacgcacactacccgctcgacaaacagcaacatcacctctacct
ccttcatctcctcccccggcgtcatccccaatgtcttcacccgcccgtcgtataaatctt
gtatcctctcctgggcctatgggccctgctcccgaagagaatgaatacgataatttacca
tataaactccctccaggcccttattctccaagtaaacccgacctctcttacgctgccttg
gtggggcgtgccattttatcatctcctgaacatcgccttactctccaagaaatttatgat
tggattacaatagtgtatccacattataaacgtggagagactacctggatgaacagcata
cgccatgttttaagcaccactgtatgtttccgcaaagttccaagagaccgttctgtcggt
aggacattatgggctatctacgatgaagatatcgaatgtttcaaggacggtggtttcaag
aagcatctttgcaaggattatgtcaatggtaatgacggtaaagaaaaacaatctggcagt
tcgaagggcaaagctagggccagaaagcgcgtcgacgatgaagaagccatcgaaggccga
aaaacaaagaagttgaagaaagagcaatgcgccattacgggcaacatctcgaccttcgat
tcacatgttgccgggccatcgttcatgggatccagcaccctatcgtctcgacctctattc
cctccaacacgcccaaccgctcaccatcaaccgtactaccagagttgtgtcccccaaacc
caaggattccccacggaagtcatcttcccacctttacctgctgcagctgctttcaatcga
gttgtgaataatctcaacaccagtcacaacaataatgtttcatcttccacgacactaacg
accattaaggactcctctgcggtggaggcctctcctcctccgagtagttcttcacccatt
ctttcagcatcatctatttcatcttcttcactctcttcttcgatccctgaacttactccg
aatctcagttcttccagcccaccatcctcacttcctgccaccagcgacatagatatcgat
tgccccgagagtcggcccatgagcgtaaaaccagatgtgcttcatgacattggaaataca
gctcttgcgattagcgacatatttacggatgaaggcgaagctgacacctccactcctgct
gaatgtactgaagatgacatcttcaacacagcactattagggcctgtcacaacctggggt
caatctcccaaggttcctggccttctacaacctggaattgagctactggagtctaacaca
gattctgacgaagattctgatatatctattcgagatagaaaaggcaagaaaaaacaaggc
acccgcaattacaaggggtctgtctttcccccaatgccttcatcgccttcacttaatcgc
gggaagcatgcatcagccaactctgaaaatgcaggtcgcccgtcaacgccagcctcttta
cctgccttgccctcgacgcctcctcgaagttcaatactagatcatcaaatttcttctact
cgcactcctctttctcacaagggccttcatatgagcccatcagccagcctggctcactac
aaatccaacctggacccgccgcctgtatataatggaagtataccggccctcgataatcct
caggccgatgaagaggatcttatgcggacccctcggaaacgcgggactaacgccagcgct
cccacatcgtttggacccccagttactccaaggaaactcatcttttctgctaaccttgaa
gattcacctttccgcactcccagcaataatctgaatatgtccccattccgtacccccggc
tcgcgttctatcttcgaccctcatgatcctaggacactccttgacgaggagctcagtggg
atgcactataactacgatagcagccctgctagtgggttgttcggaagagggcgaggatct
ctcctctatgacagtcctggttttgagagtcctgccaagtggtggtga
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