Pseudomonas cucumis: PSH97_18495
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Entry
PSH97_18495 CDS
T09632
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcuc03000
]
PSH97_18495
Transcription factors [BR:
pcuc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSH97_18495
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_30
AAA_5
AAA_2
HTH_7
AAA
HTH_23
AAA_3
Mg_chelatase
HTH_22
HTH_Tnp_1
AAA_7
HTH_17
HTH_20
PAS_8
HTH_28
nSTAND3
PAS
HTH_10
AAA_16
Phage_CI_repr
HTH_11
HTH_psq
DUF815
Phage_CP76
HTH_AsnC-type
MCM
Motif
Other DBs
NCBI-ProteinID:
WLG83097
UniProt:
A0AA49LZ63
LinkDB
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Position
4070251..4072101
Genome browser
AA seq
616 aa
AA seq
DB search
MAAPAPPLSHDAIIQDSWSRCRAFGLDHQSAPAFDQLPADGIAQLLESQHSLVQTTHQEV
LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPSLTRGFSAGASWMERCSGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFHGQHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLGIS
LSRVSVESLFKVSLLELLNQPDGLPFALQASGRNRFQCLLKRPKQAPIHARLFSEPKSAE
PTVATPAAISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASS
RSKQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMP
LPTQARLLRVLQERCVQPVGSSELFPVDIRIISATNRSLREQVQLGRFREDLYYRIGGLT
LELPPLRERSDKQALFKRLWEQHREPSQWAGLSPEVMELFSRHPWPGNLRQVSSVMQVAL
AMAEEQPVRPEHLPDDFFVDLEMEPVDSPEPIAVDLNDAEALNRQLQAAGGNISHLARRL
GVSRNTLYKRLRQSGD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacctgccccgccgctctcccacgacgccatcatccaggactcctggtcccgc
tgccgcgcgttcgggctcgatcatcagagcgcgccggcgttcgatcagctgccggccgat
ggcatcgcccagttgctggagagccagcactcactggtgcagaccacccatcaggaagtt
ctgccgtattacgagaacatcctcagcaactccaattgcctgatcatgcttgccgataat
cagggccaggtgctgacgtcctggggtacccagcgtttcatcgagccgagcctgactcgc
ggtttcagcgccggcgccagctggatggagcgttgcagcgggaccaacgccatcggtact
gcgttggcctgcgagcaggccgtgcacatcgagcatgacgaacactttctcaaggccaac
cgcttcatgaccggctccgccgcaccgattttcgatgccgagcgcaaggtgatcgcggta
ctggatgtgtccagcgacagctacctgccgccgtcgcacaccttgggcatggtcaagatg
atgagccagactgtggaaaaccggctgatcctcaacctgttccatggccagcatttccaa
ctgactttcaacaccgggctgaataacctcgacagccaatgggccgggttgctgatcttc
gacgaaaccggtcaggtgctgtcggccaatcgccgggccgacaacttgctgggcatcagc
ctgtcgcgggtcagcgtcgaaagcttgttcaaagtctcattgctggagttgctgaaccag
ccggacggcctgccgtttgccctgcaagcctcggggcgcaaccgttttcaatgcctgttg
aaacggccgaaacaggcgccgattcatgctcgactgttttctgaacccaagagcgccgaa
cccaccgtggcgacgcctgccgccatcagcctcaataccctgcattttggcgacagccgc
gtggaaaaagccgtgcgccaggccgagcgcttgctggaaaaagacattccgctgttgatc
cacggggaaaccggggtcggcaaggaagtcttcgtcaaagccctgcaccaggccagttca
cgcagcaaacagccgttcattgccgtcaattgtgcagcgatccccgccgaactggtggaa
tccgagctgtttggctacgagaaaggcgcattcaccggcgccaatcagaaaggcagcatc
gggctgatccgcaaggccgacaaaggcaccctgttcctcgatgaaatcggcgacatgccg
ctgccgacccaggcccgactgttgcgggtattgcaggagcgttgcgtgcaaccggtgggc
agcagcgagctgttcccggtggacattcggattatttcggcgaccaaccgctcgttgcgc
gaacaggttcagctggggcggtttcgtgaggatttgtattaccgcattggtggtttgacc
ctggaactgccgccactacgggaacgcagcgataaacaagcactgttcaagcgcttgtgg
gaacagcatcgcgaaccgtcgcagtgggccgggttgagccccgaagtgatggagctgttc
agtcgtcatccgtggccggggaatttgcgccaggtgagcagtgtgatgcaggtggcgttg
gccatggccgaggaacaacccgtgcggccggagcatttgccggatgatttttttgtcgat
ctggagatggagccggtggattcgccggagccgatagcggttgatttgaatgatgccgag
gcattgaatcggcagttgcaggcggctggggggaatatttcgcacctggcgcggcggttg
ggggttagtcgcaataccctttacaagcgattgcgtcagtcaggcgactga
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