Phascolarctos cinereus (koala): 110193387
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Entry
110193387 CDS
T05867
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03250
Viral life cycle - HIV-1
pcw05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110193387
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110193387
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110193387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110193387
03110 Chaperones and folding catalysts [BR:
pcw03110
]
110193387
04121 Ubiquitin system [BR:
pcw04121
]
110193387
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110193387
Chaperones and folding catalysts [BR:
pcw03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
110193387
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110193387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
zf-RanBP
WH1
Motif
Other DBs
NCBI-GeneID:
110193387
NCBI-ProteinID:
XP_020820796
UniProt:
A0A6P5IPD1
LinkDB
All DBs
Position
Unknown
AA seq
2346 aa
AA seq
DB search
MLDAVDGKTEDAMSAFEAIKNVVSYWNLALIFHRKAEDIENDALSPEEREECKNYLRKTR
DYLIKISDESCTDPAVAKKLPVPLESVKEMLNSVMQELEEYSEGGPHCKNGSPRNIDSDI
KHSIPSPTKFSLSPSKSYKFSPKTPPRWAEDQNSLLKMICQQVEAIKKEMHELKLNSSNS
MSPHRWPAEAYGTDSVPDGYQGSQNYHGAPLTVATTGPSVYYSQSPAYNSQYLLRTTANV
TPTKAPVYGMNRLTPQQHIYAYPQQMHTPPVQNPPACMFSQEMYGPPLRFDSPATGILSP
RDDYFNYNVQQASTNPPLPEPGYFTKPPVVPHPSKSSESRVIEFGKSNFGQPMPGEGVRQ
PLTTSAQAAQPTTFKFNSNFKSNDGDFTFSSPEVVGHPPPAAFGNSESLLGLLTSDKPSH
DDGYGGTKPVPSQTGAPRNTFSFGSKNISNVSFTEGVGHSQCKNSLFGRNDDVFTFQSPG
KTVFGTPTPDLANKSHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNR
AKLFRFDAESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYINPDMKLTPNA
GSDKSFVWHALDYADESPKPEQLAIKFKTPEEAAHFKRKFEEAQEILRTAASNISTANQS
VRVLKDTKNQDSKDTGKPDSGHPNFGFQMSRKDGLWDCNSCSVKNVATAKKCVSCKNLNP
NNKEPLGPPLVENTSAFKPGTEKTQEGFGLIAKKEDHWDCSVCLVRNEPTVSKCIACQNT
NTSNKSVPSFSQQTSFKFGQGELSKPVTSDLGTLFPKKDGQWNCSVCLVQNEANAKKCIA
CQNPNSQSQPSSKILAPPALKLSTPETSKSTKGGFEGMFTKKEGQWDCSVCLVRNESSSL
KCVACEAPNPVDKAEASSDFTFGFKSKLSEPSGSQMATGFKCDFSEKAFKFGSAEQGFKF
GHVEQGSSPSSFTFQVPSSTEAKPTKEGFSFTMPASAGGFKFGIQESGDQKGNEKSIEED
AAFKSHDVNNKQDSSDLVFGHSSSNFTFADLAKSGEGFQFGKKDPNFKGFSGAGEKLFSS
QSAKVSSPKANTSSDLEKDDDAYKTEDNDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRV
KLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSG
SDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDT
GRAAKLIQRAEEMKSGLKDLKTFLTNDKKLTEEENNSSSLAVSTSDLTVKPHAETTGPSL
EWDNYDLREDALDDSVSSSSVYASPLSNSPVRKNLFRFGDSTTGFNFSFKSALSPSKSPA
KLNQSGTSVGTDEESDVTQEEEKDGQYFEPVVPLPDLVEVSSGEENEQVIFSHRAKLYRY
DKDAGQWKERGIGDIKILQNYDNKHVRIVMRRDQVLKLCANHRVTPDMTLQNMKGTERVW
VWTACDFADGERKVEQLAVRFKLQDVADAFKQIFDEAKQAQEKDILLMPHFSRAATPREF
ACGKIAVAVLEETTRERTDLNQGSDTTDTVVEVGEVCSTSETPTKAVVSPPKFVFGSESV
KSIFSSEKAKPFAFGNSSTTGSLFGFSFNAPLKNKSGEDVSDEIERKSEPSKCEAQKSSN
IKPFAESKAEKPLTPFPKEEPSTNYAFKTLEKGFNFSLFKSNPMAFWTSTPSSQPESKAE
IKKEPEELSTDDVLIVYELTPTPEQKDLAISLKLPPTFFCYKNRPDYISEEEDDDEDFES
AVKKLNGKLYPDDPDECKGSQEFVTGEVVPDHDKECVIVWEKQPTSEEKAKAETLKLPPT
FFCGVCSDTDEDNSHPEDFNSEVQKVQEAKKLLDDDEVTSSTDTASTGGTKVPASFVCKS
EEPDSTTESSDAAHNSSGANDKPVDLSNKKEDEADSTSQEVERTVSFGFGTNTGLSFADL
ASSNSGDFAFGSKDKNFQWANTGAAVFGRQATRKSGEDEEGSDEEVVHNEDIHFEPIVSL
PEVEVKSGEEDEEVLFKERAKLYRWDRDVLQWKERGVGEIKILFHTMKNYYRILMRRDQV
LKVCANHVITKAMELKPLNVSNNALVWTATDYADGEAKVEQLAVRFKTKEMSDSFKKKFE
ECQDNLSKLQKGQVSLVGELSQETNPVVFFEIFADDEPLGRITMELFSNVVPQTAENFRA
LCTGERGFGYRNSIFHRVIPDFVCHGGDITKHDGTGGRSIYGNTFEDENFTVRHTTPGLL
SMANRGQHTNNSQFFILLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPNGLVSKRIMI
TECGQI
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgcagttgatgggaaaactgaagatgccatgtcagcatttgaagcaataaaa
aatgttgtttcctattggaatcttgccctgatttttcataggaaagcagaagacattgag
aatgatgccctttccccagaagaacgagaagaatgcaaaaactacttgaggaaaactaga
gactacttaataaaaatttcagatgaaagttgcacagatcctgctgtagctaaaaagctt
ccagttcctttggagtctgtaaaagagatgcttaattcagtaatgcaagaacttgaagaa
tatagtgaaggaggacctcattgtaaaaatggttcgccccgaaatatagattctgatata
aaacattctataccatctccaaccaaattttctttatcaccaagtaaaagttacaagttt
tctcctaaaactcctcctcgatgggcagaagatcaaaattctttattgaaaatgatctgc
caacaagtagaagccattaagaaagaaatgcatgagttgaagctaaacagtagtaattct
atgtctccacatcgttggcctgcagaagcctatggaacagattcagtgcctgatgggtat
cagggatcacaaaattaccatggagctccactaacagttgcaactactggcccttcagtg
tattacagtcagtcaccagcatataattcccagtatcttctcagaacaacagctaatgtt
acaccgacaaaggctccagtttatggcatgaaccggcttacacctcagcagcatatttat
gcttatccacaacaaatgcatacacctccagtgcaaaatccacctgcctgtatgttctct
caagaaatgtatggtcctccattgcgttttgattctcctgcaactggaattctgtcacca
cgagatgattactttaattataatgttcaacaggcaagcacaaatccacctttgcctgaa
cctggttatttcacaaaacctccagttgtacctcatccttcaaaatcttcagaatccagg
gttatagaatttgggaaatctaactttggacagcctatgccaggtgaaggagtgaggcaa
cctttaacaacatcggcacaagcagcacagccaactacctttaaatttaactccaatttt
aaatccaatgatggtgactttacattttcatcacctgaagttgtggggcaccctcctcct
gcagcttttggtaacagtgagagcctcctaggtctcctaacttcagataaaccttcacac
gatgatggctacggtggaacaaaaccagttcctagtcagacaggtgcaccaaggaatacg
ttcagttttggtagcaaaaatatttctaatgtttcatttacagaaggcgtgggacacagt
caatgtaaaaattctctttttggtcgtaatgatgacgtgtttactttccaaagtccaggc
aaaacagtgtttgggacaccaactccagacttagcaaataagagtcacgaaacagatgga
ggaagtgcccatggagatgatgatgatgatggccctcactttgaaccagtagttccactt
cctgataagatagaagtgaaaactggtgaggaagatgaagaagaattcttttgtaatcgt
gcaaaattattccgctttgatgcagaatctaaagaatggaaggagcgaggcattggcaat
gtgaagatattgaggcataaaacatctggcaaaattcgtcttctcatgagacgagagcaa
gtactcaaaatatgtgcaaatcattatataaatccagatatgaaactgacacccaatgct
ggctcagataaatcatttgtatggcacgctcttgactatgcagatgaatcaccaaagcca
gagcaacttgctattaagtttaaaactccagaggaggcagctcatttcaaacgtaagttt
gaagaggcccaggaaatcttaagaactgcagcttcaaatatttccacagcaaatcaaagt
gttagagttttgaaagacaccaagaaccaggatagcaaggatactggaaaacctgactca
ggacatccaaattttggtttccaaatgtcaaggaaagatgggctatgggattgtaacagt
tgctcagtaaagaatgttgcaacagcaaagaaatgtgtatcatgcaaaaacctaaatcca
aataacaaagagcctttgggcccaccattagttgaaaacacttcagcttttaagcctggc
acagaaaagactcaagaaggatttggattgattgctaagaaagaggatcactgggattgc
agtgtgtgtttagtgaggaatgaaccgacagtatctaagtgtatagcctgccaaaataca
aacacgtcgaataaaagtgttccatcctttagtcagcaaacttccttcaagtttggccag
ggagaactttctaagcctgttaccagtgatttgggaactctgtttcctaagaaggatgga
cagtggaattgcagtgtgtgtctggtgcagaatgaagcaaatgctaaaaagtgtattgct
tgtcagaatccaaattcacaaagtcaacccagttccaagattctagcacctcctgctttg
aagcttagtactccagagaccagcaagtctactaagggtggatttgagggaatgtttact
aagaaggaaggacaatgggactgtagtgtttgcttagtacgaaatgaaagctcttccttg
aaatgtgtggcctgtgaagcaccaaatccagtcgataaagcagaagcttcttcagatttt
acatttggcttcaaaagtaaattatctgaaccttctgggagtcagatggcaactggcttt
aagtgtgacttttcagaaaaagcttttaaatttggcagtgcagaacagggttttaaattt
ggtcatgttgagcaaggaagctcaccttcttccttcacatttcaggttccctctagtacg
gaagctaaacccacaaaagaaggatttagttttactatgcctgcatctgctggtggattt
aaatttggcatacaggaatctggtgatcaaaaaggtaatgagaagtccattgaagaagat
gctgctttcaagtctcatgatgttaataacaaacaagatagtagtgatttagtgtttgga
cacagtagtagcaatttcacttttgctgacctcgcaaagtcaggggaaggatttcagttt
ggcaaaaaagatccaaattttaaaggattttcaggtgcaggggaaaaacttttttcatca
cagagtgctaaagtgtcctctcctaaggccaatacatcatcagaccttgagaaagatgat
gatgcatataagactgaggacaatgatgatatccatttcgaacctgtagttcagatgcct
gaaaaagtggagcttgttacaggagaagaagatgaaaaggttctgtattcgcaaagggtg
aagttatttagatttgatgcagagataagtcagtggaaagaaaggggcctaggaaattta
aagattcttaaaaatgaagtcaatggcaaactaagaatgctgatgcgacgagaacaagta
ctcaaagtgtgtgctaatcattggatcactactacaatgaaccttaaacctttatctggg
tcagacagagcatggatgtggctagccagtgatttttctgatggagatgctaaactggaa
cagttagcagctaagtttaaaacaccagagctggctgaagaattcaaacagaaatttgaa
gaatgccagagacttttattagacataccacttcagacgcctcataaacttgtcgatacc
ggcagagctgccaaactaatacagagagctgaagaaatgaaaagtggactcaaagatctc
aaaacgtttttgacgaatgacaaaaagctcactgaggaagagaataacagttcaagctta
gcagtgagtacttctgacttaacagtaaaaccacatgctgaaactactggaccttcatta
gaatgggataactatgacttaagagaggatgctttggatgatagtgtaagtagtagttcg
gtatatgcatctccattatcaaatagtcctgtgagaaaaaatctcttccgctttggtgat
tcaacaacaggatttaatttcagttttaagtctgctttgagtccatccaaatcccctgcc
aagttgaatcagagtgggacttctgttggcactgatgaagagtctgatgttacccaagaa
gaggagaaagatggacagtattttgagccggtcgtaccattacctgatctggtagaagtg
tccagtggtgaggaaaatgagcaagttatctttagtcatcgagccaaactctatagatat
gacaaagatgctggccagtggaaggaaagaggaataggtgacataaagattttgcagaat
tatgataataaacatgtacgaatagtgatgcgaagagaccaagtattaaaactgtgtgcc
aatcatagagtaacaccagacatgactttgcaaaacatgaaagggacagaaagagtttgg
gtttggactgcgtgtgactttgctgatggagaaagaaaagtagaacaattagctgtccgt
tttaaactacaggatgttgcagatgcattcaagcaaatttttgatgaagcaaaacaggcc
caagaaaaagatatcttgctaatgccacacttttcccgtgctgccactcctcgagaattc
gcatgtggtaaaattgcggtagctgtattagaagaaaccacaagggagagaacagattta
aaccagggttctgatacaacagatacagttgtagaagttggagaagtatgtagcacttct
gaaacaccaacaaaagcagttgtttctcctccaaagtttgtttttggctctgaatctgtt
aaaagcatttttagtagtgagaaagcaaaaccatttgcatttggcaacagttcaactaca
ggttctttatttggattcagctttaatgcacctttgaaaaataaaagtggggaagatgtt
tcagatgagattgaaagaaaatcagaacctagtaaatgtgaagcacagaagagctcaaac
atcaagccatttgcagaaagcaaagcagaaaagcccttgactccttttccaaaggaagag
ccctcgactaattatgcatttaaaacattagaaaagggatttaattttagtctttttaaa
tctaatccaatggccttttggaccagtaccccctcctcacagcctgagagcaaagctgag
ataaagaaggaaccagaagaactttccacagatgatgtactcattgtatatgaactaact
cctactcctgaacaaaaagatcttgctatcagtcttaaacttcctccaacttttttctgc
tataagaatagaccagattacattagtgaggaagaagatgatgatgaagattttgaatca
gctgtcaagaaacttaatggaaagttgtatccagatgacccagatgaatgtaaaggatcc
caagaatttgtaacaggagaagttgttccagaccatgataaagaatgtgtgattgtctgg
gaaaagcaaccaacatctgaagaaaaagcaaaagcagaaactctaaaacttcctccaact
tttttctgtggtgtttgcagtgatactgatgaggataatagccatccagaggactttaac
tcagaggttcaaaaagtccaggaagcaaaaaaattgcttgatgatgatgaggttacaagt
tcaactgatacagcatctactggagggactaaagttcctgcttcattcgtatgtaaatct
gaagagcctgactccactactgaatcttccgatgcagcgcacaattcatctggggctaat
gacaaacctgtagacttatctaataaaaaagaagatgaggcagattccacaagccaagaa
gtagaaagaacagtgtcatttggatttggtactaacacgggattgtcgtttgcggatttg
gcttctagtaattctggagattttgcttttggttcaaaagataaaaatttccagtgggca
aatactggagcagctgtgtttgggaggcaagcaacccgtaaaagtggagaagatgaagaa
ggtagtgatgaagaagttgtacataatgaagatatacattttgagccaattgtttcttta
ccagaggtggaagtgaaatctggagaagaagatgaagaagttttgtttaaagaaagagcc
aaactttacaggtgggacagagatgttcttcagtggaaagaacggggcgttggagagata
aagatccttttccatacaatgaagaactattatcgaatccttatgagaagagaccaagtt
ttaaaagtttgtgcaaatcatgttattaccaaagcaatggaattaaaaccattaaatgtt
tcaaataatgctttagtttggactgctacagactatgcagatggagaagcaaaagttgaa
caacttgcagtcagatttaaaactaaagaaatgtcagattcttttaagaagaaatttgaa
gaatgtcaggataatttatcaaaactgcagaagggacaagtatcacttgtaggagagttg
tcacaggaaacaaatcctgtggtattttttgaaatatttgctgatgatgaacctctggga
cgtatcactatggaactattctcaaatgttgtgcctcaaactgctgagaacttcagggca
ctgtgcacaggagaaaggggctttggttacaggaactcaatttttcaccgtgtaattcca
gattttgtttgccatggaggagatatcaccaaacacgatggaacaggaggacggtctatt
tatgggaacacatttgaagatgaaaactttacagtgagacatactacacctggcttattg
tcaatggctaatcgtggccaacacaccaataattctcaattttttatccttctgaagaaa
gcagaacatttggactttaagcatgtagtatttggatttgttaaagacggcatggatact
gtgaaaaagattgaatcatttggttctcctaatggtttggtgagcaaaagaattatgatc
acagagtgtggacaaatataa
DBGET
integrated database retrieval system
