Phascolarctos cinereus (koala): 110196700
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Entry
110196700 CDS
T05867
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110196700 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110196700 (LIG4)
Enzymes [BR:
pcw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110196700 (LIG4)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110196700 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
Phage_term_smal
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
110196700
NCBI-ProteinID:
XP_020825723
UniProt:
A0A6P5IXF9
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MATSQASRTVASQVPFADLCSTLERIQKSKSRPEKIKYLKEFLDSWRKFHDALHKNEKGV
TDSFYPAMRLILPQLERERMAYGIKETMFAKLYIELLNLPKEGRDAQKLLNYRTPTGTRG
DAGDFSMIAYFVLKPRCPKQGSLTIQQVNDVLDLIASNNSARRKDLVKKNLLQLITQSSA
LEQKWLIRMIIKDLKLGFSQQTIFSLFHRDAAELHGVTTDLEKVCRELHDPSVGLSDISI
TLFSAFKPMLAAVADIQRIEKDMKHQSFYIETKLDGERMQMHKDGDVYRFFSRNSYDYTE
QFGDSSLNGSLTPFIHNAFKTDIQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNNKKLGHETLRKRYEIIDSVFTPIKGRLEVIQKTEANTKKEVIDALNE
AIDKREEGIMIKNPLSIYKPDKRGEGWLKIKPEYINKLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWKPFHRRAPPNSILC
GTEKPEVYIEPCNSVIVQIKAAEIVSSDMYKTDCTLRFPRIEKIREDKEWYECMTLDELE
NLRGKASGKLASKHLYIGGDDEEPQEKKRRSLKVKKAIGIVEHLKAPDLSNINKISNVFE
DVEFCVMTGTDSHSKPDLENHIAELGGYIVQNPGPDTYCIVAGTENVRVKNIISSNKHDV
VKAEWLLECFKAKECVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFTDTDLVQLKEVFSR
IKNVKENSPKGMSSVIADLEYRYSWDSCPLSMFRHYVIYVDMYAVINDLTTQIQGSRLSI
KALELRFHGAKVISCLEEGVSHVIIGEDHSRVEEFKAFRRALKKKYKILQELWVTDSLKK
GELQEENHYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcacaagcttcacgaacagtagcttcacaggtgccttttgcagatttgtgt
tcaactttagaacgaatacaaaagagtaaatcccgtccagaaaaaatcaaatacctcaag
gaatttttagattcatggcggaagtttcatgatgctcttcataaaaatgaaaaaggagtc
acagactctttttatccagccatgagacttattcttccacaactagaacgagagaggatg
gcctatggaattaaagaaactatgtttgctaagctttatatcgaactgcttaatttacca
aaagaaggaagagatgctcagaaacttttaaattacagaacaccaactggaactcgtgga
gatgctggagacttttcaatgattgcgtactttgtgttgaagccccggtgtccaaagcaa
gggagcttaaccatacagcaagtcaacgatgttttagacttgattgctagcaacaattca
gctagaagaaaggatctggtaaagaagaaccttcttcaactcataactcagagttcagct
cttgaacaaaagtggcttatccgcatgattataaaggacttaaaactgggttttagccaa
caaactatattttctcttttccacagagatgctgctgagttgcatggtgttacaactgat
ctagaaaaagtctgcagggaacttcatgatccttcagttggactcagtgatatttcaatc
acattattttctgcttttaaaccaatgctggctgctgtggctgatattcagcggatcgaa
aaggacatgaaacaccagagtttctacatagagacaaaactagatggtgagcgtatgcag
atgcataaagatggagatgtgtatcggttcttttctcgaaatagttacgattacactgaa
cagtttggtgactcttcccttaatggttctttaacaccatttattcataatgctttcaaa
actgacatacaaaactgtattcttgatggtgagatgatggcctataatcccaacacacag
acattcatgcagaaaggaaataagtttgatattaaaagaatggtagaggattctgaacta
cagacatgttactgtgtttttgatgtgttgatggtcaataataagaaactggggcatgag
actctgaggaaaaggtatgaaattattgatagtgtctttacaccgataaaaggtagacta
gaagtgatacagaaaacagaagctaacactaaaaaagaagtcattgatgccttgaatgaa
gctatagataaacgtgaggagggaatcatgattaaaaatccactttccatttacaagcca
gataaacgtggtgaaggatggttaaaaattaagccagagtatataaataagttaatggac
gaactggacattttaattgttggtggttattggggtaaaggttctcgaggaggaatgatg
tctcattttttgtgtgcagtagcagaaacaccccctcctggtgaaaagccatctgtgttt
catactctttgtcgtgttggttctggatacactatgaaagaactgtatgatcttggtttg
aaattatccaaacactggaaaccatttcatagaagagctccaccaaatagcatcttatgt
ggtacagagaaaccagaagtttatattgagccttgtaattctgtcattgttcagattaaa
gcagcagaaattgtcagcagtgatatgtataaaactgattgtactctacgattccctcga
attgaaaagataagagaagataaagagtggtatgaatgtatgactctggatgaattagaa
aaccttagagggaaagcatctggaaagcttgcttctaagcacctttatataggtggtgat
gatgaagaaccacaggaaaaaaaacgcagatctttgaaggttaagaaagctattggaatc
gttgagcacttaaaagctcctgatctttctaacataaacaagatttctaacgtatttgaa
gatgtagaattttgtgttatgactgggacagacagccattcaaaacccgatctcgagaat
cacatagcagaattgggtggttatattgtacagaaccctggcccagacacatattgtata
gttgcaggtactgagaatgtgagagtgaaaaatatcatctcttcaaataagcatgatgtt
gtaaaggcagagtggctgttagagtgttttaaggccaaagaatgtgttccatggcagcct
cgctttatgattcacatgtgtccatccacaaaagaacattttgcccgtgaatatgactgc
tatggtgacagttactttactgacactgatttggtacaactgaaggaagtattctcaaga
attaaaaatgttaaggaaaatagtcctaaaggaatgtcgtcagtaattgcagatttagaa
tatcgttattcctgggacagctgccctctcagcatgttccgacactatgtcatatatgtg
gatatgtatgctgttattaatgacctcactacacaaatccagggaagcaggctatccatt
aaagccctggagctacggtttcatggagcaaaagtcatttcatgtttagaagaaggagtg
tcccatgtaatcattggggaggatcacagtcgtgttgaggaatttaaggcttttcgtaga
gctcttaagaaaaagtataaaattctacaagaactttgggtaactgattctttgaaaaag
ggtgagttgcaggaagaaaatcattacttgatatga
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