Phascolarctos cinereus (koala): 110197031
Help
Entry
110197031 CDS
T05867
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcw04040
]
110197031 (SCN10A)
Ion channels [BR:
pcw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110197031 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
Lustrin_cystein
GPHH
Motif
Other DBs
NCBI-GeneID:
110197031
NCBI-ProteinID:
XP_020826253
UniProt:
A0A6P5IYW3
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MENPFGSLETNNFRLFTPESLAAIERLIEEGKHQNKVKEKEHEEEEKKESKAKAEKPRPQ
LDLKACNQLPKFYGELPPELVGEPLEDLDPFYRNHRTFIVLNKGRTIFRFSATRALGLLS
PFHPLRRTAIKVSVHSLFSFFIMMTIMVNCVFMTQSETPPTVEYVFTGIYTFESLIKILA
RGFCLNEFSYLRDPWNWLDFSVISLAYIAEVTDLRGVSALRTFRVFRALKTVSVIPGLKV
IVGALIHSVKKLADVMVLTVFCLSVFALVALQLFKGNLRHKCTKNCTFLNVTSDLYGENK
TWDFCKNDPDYLVYKNGTKDYLLCGNGSEAGSCPEGYFCLKIGGNPDFNYTSFDSFGWAF
LALFRLMTQDYWERLYQQTLRASGKIYMLFFVLVIFLGSFYLVNLILAVVTMAYEEQNET
TKAEIEAKEKKFQEALEMLRKEQEVLAAMGIDAGSLLSFEMSPLASKNSKERRNKMNQMK
SDDSIEDASYHHQRKMSFLSINYGPSGNSGKRRYSYGNFNLKSQDGPDSVFADDEKITNK
ENESRRGSLLLSHMGQRMSMQNQRITSEEAKKKNSLAAHTLSAEYFDEPFRVKRAVSVVS
IITSVLEELEESEQRCPPCWIRFAQKYLIWECCEPWVKFKDLISNIVMDPFTELAVTLCI
VINTLFMSMEHYNMTSSFSSMLQIGNIFFTVIFTAEMVLKLIAFHPYYYFQRPWNIFDSV
IVTLSLVELGLPQRASLSVLRSFRLLRVFKLAKSWPTLNNLIKIIGNSVGALGNLTLILA
IIVFIFAVVGKQLFGENYVKLRNEVTGQLPRWHMHDFFHSFLIVFRILCGEWIETMWDCM
EVSGIYMCLIVFLMVMVLGNLVVLNLFIALLLNSFSADNLASEDDGELNNLQVALARIQK
FMHLIVQAIRDFWGRKLRTSKAKEEKQKVMVKMALSESGAPNHMAAQVLTNVGSIKDNPA
PNGLALELTMCPTNDPGNVMVNSNMEISVPMAVAESDIEDEEEEEEEEEEPNRGDVTSCS
EGSTVDIPDPEIILKKITDLREILEEPKDCFTEDCIRLCPCCTADTGKFPGSLFWSLRKT
CYRIVEHNWFESFIIFMILLSSGALAFEDIYLDERHTLKAILEFSDLVFTYIFILEMLLK
WVAYGFKTYFTNAWCWLDFLIVDVSMISLIANTLGYSDIGPIKSLRTLRALRPLRALSRF
EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKFGRCINITLGDFSPVNVS
IANNKTQCNEQNSSGLFWDTVKVNFNNVGIGYLALLQVATFKGWMDIMYAAVDSRKVEEQ
PQWEANVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKISGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDVAIMVLICLNMITMMVETDNQSDEKT
KILNRINQFFVAIFTAECVLKAIALRHYYFTSGWNIFDLIVVLLSVASLVFSGIMKSLES
YFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MANFAYVRQEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPHCDPDSENS
TKSKGNCGNPTIGIAFFVSYIIISFLIVINMYIAVILENFNVATEESTEPLSEDDFDMFY
ETWEKFDPEATQFITFSALSDFADALTGPLRIPKPNQNILIQMDLPLVTGDKIHCLDILF
TFTKRVLGESGEMDTLKAQMEEKFMAANPSKVSYEPIANTLRSKQENLSAAIIQRAYRNY
LMQHSLRQVTTVCPNEAGERLCERATEDEGLIEFMIKENSELADNSETASTMSFPPSYDS
VTRGLSEEGQLDMPNTGLKEEDASYDQLSQDLDKASSM
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccctttggctccctggagacaaacaacttccgcctttttactcctgaatct
ctggctgccattgaaaggctaattgaggaggggaaacatcagaacaaggtgaaggagaag
gagcatgaggaggaggaaaagaaagaatcaaaggccaaagctgagaagccccgaccccag
ctagacctaaaggcctgcaaccagctgcccaagttctatggcgagcttcccccagaattg
gtgggggagcctctggaggacctggaccccttttacagaaatcacaggacatttatagtc
ctaaacaaagggcggactatcttccggttcagtgcaacccgggctttggggctcctcagt
cctttccatcccctccggagaactgccatcaaagtatcagtccactccctgttcagtttc
ttcatcatgatgacgattatggtcaactgtgttttcatgacccagagtgaaactccaccg
actgttgagtatgttttcacgggtatttacacatttgaatccttaataaaaatattggcc
cgaggattttgtctgaatgaatttagctaccttcgagatccatggaattggctggatttt
agtgtgatttccctggcgtacattgctgaagttacagacctgcgtggggtttcagctctg
agaactttcagagtgttccgggctctgaaaacagtttcagtgatcccaggcttaaaggtc
atcgtgggtgccctgatccactcggtgaagaagctcgcggatgtgatggtgctgacagtc
ttctgcctgagcgtctttgcgctcgtggccctgcagctcttcaagggaaacctcaggcac
aaatgcacgaagaactgcacatttcttaacgtgaccagcgatctctatggtgaaaacaag
acatgggatttctgcaaaaatgaccccgattacttggtgtacaagaatggcacaaaggat
tacctactctgtggcaatggctccgaagctgggagctgtcctgaaggctatttctgccta
aagataggaggcaatcccgattttaactacaccagtttcgattcctttggctgggctttc
ctggctctgttccgcctgatgacgcaggattactgggagcggctctaccagcagaccttg
agagcatctgggaaaatttacatgctctttttcgtgcttgtcatttttctgggatccttc
tatctggtcaatttgatcctggcagttgtgaccatggcttatgaagagcagaatgaaacc
acaaaggctgaaatagaagcaaaggaaaagaagtttcaggaggcccttgagatgctcagg
aaagagcaggaggtgctggctgccatggggattgatgcaggctcacttctttcctttgaa
atgtcacctctagcctccaaaaattccaaagaaagaagaaacaagatgaatcaaatgaaa
tctgatgattccatagaggatgccagctatcaccaccagaggaagatgtctttccttagc
attaactatggtccgagtggcaattcaggcaagagaaggtacagctatggaaactttaat
ctcaaaagtcaagatggtccggactctgtctttgccgatgatgagaaaatcaccaataag
gagaatgagagtcgtcgggggtccttgcttttgtcacatatggggcagcgcatgagcatg
cagaaccaaaggattacttcagaggaagccaaaaagaagaattcgttggcagcccacacc
ttgtctgcagagtattttgatgaaccattcagagtgaaaagggcagtgagtgtagtcagt
atcattacttctgtcctcgaagaactggaagaatctgagcagagatgccccccttgctgg
atccgctttgctcagaagtatctaatttgggaatgctgtgagccctgggtgaagttcaaa
gatctgatatcaaatatcgtgatggaccctttcacagagcttgccgtcaccctctgcatc
gtgatcaacacgctgttcatgtctatggagcactataatatgacctcatccttttcttca
atgctccaaataggcaatatattcttcacagtgattttcactgctgagatggtactcaag
ctcattgccttccatccctactattacttccaaaggccttggaatatctttgacagcgtc
attgtcaccttgagcctggtggagctgggtctgccccaacgagccagcttgtctgtgctc
cgttccttcagactgctgagggtcttcaagctggccaagtcctggccaaccttgaacaat
ctcatcaagatcattggcaactctgtgggagccttgggcaacctcaccctgatcctagcc
atcatcgtcttcatctttgctgtggttggaaagcagctgtttggagagaactatgttaag
ctccgtaatgaagtcacggggcagttgcctcgttggcatatgcatgacttcttccattct
tttctcattgtgttccgaatcctctgcggggaatggatcgagaccatgtgggactgtatg
gaagtgtctgggatatacatgtgcctcatcgtcttcttaatggtgatggtgctggggaac
ctggtggtcctcaacttgttcattgctttgctgctgaattccttcagtgctgacaaccta
gcctcagaagatgatggagaactgaacaacctgcaggtagccctggccaggatccaaaag
ttcatgcatctcatagtgcaggccattcgggacttttggggcagaaagctcaggacttca
aaagccaaagaagagaagcagaaggtgatggtaaaaatggccctctccgaatcaggagcc
ccaaaccacatggctgcccaggtgctcaccaatgttggcagcatcaaagataacccagct
cccaatgggctggccttggagttgaccatgtgccccaccaatgaccctggaaatgtcatg
gtaaacagcaacatggagatctcagtcccaatggcggtggcagaatctgatatcgaagat
gaggaggaggaggaggaggaggaagaggaaccaaatagaggagatgtcacgagttgctct
gaaggcagcactgtggacatccctgatccagagataatactgaagaaaatcacggatctc
agagagatcttggaggagcccaaggattgcttcacagaggactgcattaggctctgtcca
tgctgcacagcagacacaggaaagtttcctggatctctcttctggagcctgaggaaaacc
tgctaccgtattgtggaacacaactggtttgagagttttatcatctttatgattctgctg
agcagtggagccctggcttttgaagacatttatctggatgagaggcacacactgaaagcc
atcctggagttttctgacctggtgttcacttacatctttatccttgagatgctgctgaag
tgggtggcctacggcttcaagacatacttcaccaatgcctggtgctggctggacttcctc
attgtggatgtttcaatgataagcctcatagcaaatacactaggctactctgatatcggt
cccattaaatccctccggactctccgagcactgagacctctgagagcactgtcacgattt
gaaggcatgagggtggttgtagatgccctggttggtgcaatcccttccatcatgaatgta
cttctggtctgtcttatcttctggctcatcttcagcatcatgggagtgaatctcttttca
ggaaaatttggcagatgcattaatatcaccctaggagacttctcccctgtgaatgtgtcg
attgccaataacaagacccaatgtaatgagcagaatagttcaggtctcttctgggacact
gtgaaagtcaactttaataatgtgggaataggttaccttgctcttctgcaggtggcaacg
tttaaagggtggatggacatcatgtatgctgctgtggattcccggaaggtggaggagcag
ccccagtgggaggccaatgtatacatgtacctgtattttgtcatcttcatcatcttcggg
ggcttcttcacactgaacctcttcgttggagtcataattgacaatttcaatcaacaaaag
aaaaagataagtggtcaagatatattcatgactgaagaacagaagaaatattataatgcc
atgaaaaaactaggatccaagaagcctcaaaaaccaatcccaagacctctgaacaaatac
caaggcttcgtgtttgatattgtaaccagacaagccttcgacgtggccatcatggtcctc
atctgccttaatatgatcaccatgatggtagagacagataaccagagtgatgagaagacc
aaaatcctcaaccggatcaaccaattcttcgttgccatcttcacagcagaatgtgtcctg
aaggcgattgccctgagacattactatttcaccagtggatggaacatctttgatttaatt
gttgtgctcctctcagtggccagcttggtgttttcaggcatcatgaagtctcttgaaagc
tatttctcacccacactcttcagagtcatccgcctggcccgcatcggccgcatcctccgg
ctgatccgagcggccaaggggatccgcacgctgctctttgccctcatgatgtccctccct
gccctcttcaacattggcctgctgctcttcctggtcatgttcatctactccatcttcggc
atggccaacttcgcctacgtgaggcaggaggccgggattgacgacatgttcaactttcag
acgttcgccaacagcatgctctgcctcttccagatcaccacgtctgctggctgggacggg
ctgctcagccccatcctcaacaccgggcccccgcactgtgacccagattcagaaaactcc
actaagtccaaaggaaactgtggtaatcccacgatagggatcgccttctttgtcagttac
atcatcatctccttccttatcgtcatcaacatgtacatagctgtcatccttgagaacttc
aatgtggccacagaagagagcacagagccactgagtgaggatgattttgacatgttctat
gagacctgggagaagtttgacccggaggccactcagttcattacattttcagccctttca
gattttgcagatgctctgacaggacctctgcgcattccaaaacccaaccagaatatactc
atccagatggacctgcctttggtcacaggggacaagattcactgcttggacatcttattt
acctttaccaagagagtactgggagaatctggggagatggacacactcaaggcacaaatg
gaggaaaagttcatggctgctaatccttctaaagtttcctatgagccaattgcaaatact
ctgagatcaaaacaggaaaatctgtctgctgccatcatacaaagggcctacagaaattat
ctcatgcaacactccctacgacaggtcaccactgtatgtccaaatgaggctggtgaacgt
ctatgtgagcgggccaccgaagatgaaggcttgattgaattcatgataaaggaaaacagt
gagcttgcagacaactcagaaactgcatcgaccatgtctttccccccatcttatgacagt
gtcaccagggggctcagtgaggagggtcagctggatatgcccaacactggtctaaaggag
gaagatgctagctatgaccagctgtctcaggacttggacaaggcatcatcaatgtag
DBGET
integrated database retrieval system
